Literature DB >> 7603443

Organization of telomeric and subtelomeric chromatin in the higher plant Nicotiana tabacum.

J Fajkus1, A Kovarík, R Královics, M Bezdĕk.   

Abstract

We have examined the structure and chromatin organization of telomeres in Nicotiana tabacum. In tobacco the blocks of simple telomeric repeats (TT-TAGGG)n are many times larger than in other plants, e.g., Arabidopsis thaliana or tomato. They are resolved as multiple fragments 60-160 kb in size (in most cases 90-130 kb) on pulsed-field gel electrophoresis (PFGE) of restriction endonuclease-digested DNA. The major subtelomeric repeat of the HRS60 family forms large homogeneous blocks of a basic 180 bp motif having comparable lengths. Micrococcal nuclease (MNase) cleaves tobacco telomeric chromatin into subunits with a short repeat length of 157 +/- 5 bp; the subtelomeric heterochromatin characterized by tandemly repeated sequences of the HRS60 family is cut by MNase with a 180 bp periodicity. The monomeric and dimeric particles of telomeric and subtelomeric chromatin differ in sensitivity to MNase treatment: the telomeric particles are readily digested, producing ladders with a periodicity of 7 bp, while the subtelomeric particles appear to be rather resistant to intranucleosomal cleavage. The results presented show apparent similarities in the organization of telomeric chromatin in higher plants and mammals.

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Year:  1995        PMID: 7603443     DOI: 10.1007/BF00290355

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  16 in total

1.  Changes in chromatin structure due to hypomethylation induced with 5-azacytidine or DL-ethionine.

Authors:  J Fajkus; B Vyskot; M Bezdĕk
Journal:  FEBS Lett       Date:  1992-12-07       Impact factor: 4.124

2.  Monovalent cation-induced structure of telomeric DNA: the G-quartet model.

Authors:  J R Williamson; M K Raghuraman; T R Cech
Journal:  Cell       Date:  1989-12-01       Impact factor: 41.582

3.  Structural specificities of five commonly used DNA nucleases.

Authors:  H R Drew
Journal:  J Mol Biol       Date:  1984-07-15       Impact factor: 5.469

4.  Isolation of a higher eukaryotic telomere from Arabidopsis thaliana.

Authors:  E J Richards; F M Ausubel
Journal:  Cell       Date:  1988-04-08       Impact factor: 41.582

5.  Sequence-dependent deformational anisotropy of chromatin DNA.

Authors:  E N Trifonov
Journal:  Nucleic Acids Res       Date:  1980-09-11       Impact factor: 16.971

6.  Chromatin structure of the telomeric region and 3'-nontranscribed spacer of Tetrahymena ribosomal RNA genes.

Authors:  M L Budarf; E H Blackburn
Journal:  J Biol Chem       Date:  1986-01-05       Impact factor: 5.157

7.  Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics.

Authors:  A Kenton; A S Parokonny; Y Y Gleba; M D Bennett
Journal:  Mol Gen Genet       Date:  1993-08

8.  Pulsed-field gel electrophoresis analysis of higher-order chromatin structures of Zea mays. Highly methylated DNA in the 50 kb chromatin structure.

Authors:  M L Espinás; M Carballo
Journal:  Plant Mol Biol       Date:  1993-03       Impact factor: 4.076

9.  Unusual chromatin in human telomeres.

Authors:  H Tommerup; A Dousmanis; T de Lange
Journal:  Mol Cell Biol       Date:  1994-09       Impact factor: 4.272

10.  Nucleosomal organization of telomere-specific chromatin in rat.

Authors:  V L Makarov; S Lejnine; J Bedoyan; J P Langmore
Journal:  Cell       Date:  1993-05-21       Impact factor: 41.582

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  66 in total

Review 1.  Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.

Authors:  J S Heslop-Harrison
Journal:  Plant Cell       Date:  2000-05       Impact factor: 11.277

2.  Transition between two forms of heterochromatin at plant subtelomeres.

Authors:  E Sýkorová; J Fajkus; M Ito; K Fukui
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

Review 3.  Tiptoeing to chromosome tips: facts, promises and perils of today's human telomere biology.

Authors:  J Fajkus; M Simícková; J Maláska
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2002-04-29       Impact factor: 6.237

4.  Characterization of telomere-subtelomere junctions in Silene latifolia.

Authors:  E Sýkorová; J Cartagena; M Horáková; K Fukui; J Fajkus
Journal:  Mol Genet Genomics       Date:  2003-02-13       Impact factor: 3.291

Review 5.  Telomere structure, function and maintenance in Arabidopsis.

Authors:  Karel Riha; Dorothy E Shippen
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

6.  The signature of the Cestrum genome suggests an evolutionary response to the loss of (TTTAGGG)n telomeres.

Authors:  Eva Sýkorová; K Yoong Lim; Jiri Fajkus; Andrew R Leitch
Journal:  Chromosoma       Date:  2003-10-03       Impact factor: 4.316

7.  DNA methylation at tobacco telomeric sequences.

Authors:  María I Vaquero-Sedas; Miguel A Vega-Palas
Journal:  Plant Mol Biol       Date:  2011-10-21       Impact factor: 4.076

8.  HMGB1 gene knockout in mouse embryonic fibroblasts results in reduced telomerase activity and telomere dysfunction.

Authors:  Eva Polanská; Zuzana Dobšáková; Martina Dvořáčková; Jiří Fajkus; Michal Štros
Journal:  Chromosoma       Date:  2012-04-28       Impact factor: 4.316

Review 9.  Telomeres in evolution and evolution of telomeres.

Authors:  Jirí Fajkus; Eva Sýkorová; Andrew R Leitch
Journal:  Chromosome Res       Date:  2005       Impact factor: 5.239

10.  Length regulation and dynamics of individual telomere tracts in wild-type Arabidopsis.

Authors:  Eugene V Shakirov; Dorothy E Shippen
Journal:  Plant Cell       Date:  2004-07-16       Impact factor: 11.277

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