Literature DB >> 7588804

Evidence for elongation of the helical pitch of the RecA filament upon ATP and ADP binding using small-angle neutron scattering.

C Ellouze1, M Takahashi, P Wittung, K Mortensen, M Schnarr, B Nordén.   

Abstract

Structural changes of the RecA filament upon binding of cofactors have been investigated by small-angle neutron scattering. Both ATP and ADP increased the helical pitch of the RecA homopolymer, which is observed to be 7 nm in the absence of any cofactor. The binding of ATP altered the pitch to 9 nm, whereas the binding of ADP only produced a pitch of 8.2 nm. The pitch determined for the RecA complex with the ATP analog adenosine 5'-[gamma-thio]triphosphate was similar to that found with ATP. Thus, at least three, somewhat different. RecA helical filamentous structures may form in solution. The binding of DNA to RecA did not alter the pitch significantly, indicating that the cofactor binding is the determining factor for the size of the helical pitch of the RecA filament. We also found that elongation of the helical pitch is a necessary, but not a sufficient condition, for the coprotease activity of RecA. The presence of acetate or glutamate ions is also required. The pitch of the ADP.RecA filament is in agreement with that found in the crystal structure. This correlation indicates that this structure corresponds to that of the ADP.RecA filament in solution, although this is not the species active in recombination.

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Year:  1995        PMID: 7588804     DOI: 10.1111/j.1432-1033.1995.579_2.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  10 in total

1.  A molecular model for RecA-promoted strand exchange via parallel triple-stranded helices.

Authors:  G Bertucat; R Lavery; C Prévost
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  Investigating structural changes induced by nucleotide binding to RecA using difference FTIR.

Authors:  Blaine C Butler; Ross H Hanchett; Helena Rafailov; Gina MacDonald
Journal:  Biophys J       Date:  2002-04       Impact factor: 4.033

3.  Novel polymorphism of RecA fibrils revealed by atomic force microscopy.

Authors:  Bernie D Sattin; M Cynthia Goh
Journal:  J Biol Phys       Date:  2006-10       Impact factor: 1.365

4.  A new insight into RecA filament regulation by RecX from the analysis of conformation-specific interactions.

Authors:  Aleksandr Alekseev; Georgii Pobegalov; Natalia Morozova; Alexey Vedyaykin; Galina Cherevatenko; Alexander Yakimov; Dmitry Baitin; Mikhail Khodorkovskii
Journal:  Elife       Date:  2022-06-22       Impact factor: 8.713

5.  Arrangement of RecA protein in its active filament determined by polarized-light spectroscopy.

Authors:  Katsumi Morimatsu; Masayuki Takahashi; Bengt Nordén
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-22       Impact factor: 11.205

6.  Cooperative conformational transitions keep RecA filament active during ATPase cycle.

Authors:  Sung Hyun Kim; Kaushik Ragunathan; Jeehae Park; Chirlmin Joo; Doseok Kim; Taekjip Ha
Journal:  J Am Chem Soc       Date:  2014-10-07       Impact factor: 15.419

7.  An integrative approach to the study of filamentous oligomeric assemblies, with application to RecA.

Authors:  Benjamin Boyer; Johann Ezelin; Pierre Poulain; Adrien Saladin; Martin Zacharias; Charles H Robert; Chantal Prévost
Journal:  PLoS One       Date:  2015-03-18       Impact factor: 3.240

8.  Rad51 and RecA juxtapose dsDNA ends ready for DNA ligase-catalyzed end-joining under recombinase-suppressive conditions.

Authors:  Naoto Konomura; Naoto Arai; Takeshi Shinohara; Jun Kobayashi; Wakana Iwasaki; Shukuko Ikawa; Kohji Kusano; Takehiko Shibata
Journal:  Nucleic Acids Res       Date:  2016-10-27       Impact factor: 16.971

9.  RecA and RecB: probing complexes of DNA repair proteins with mitomycin C in live Escherichia coli with single-molecule sensitivity.

Authors:  Alex L Payne-Dwyer; Aisha H Syeda; Jack W Shepherd; Lewis Frame; Mark C Leake
Journal:  J R Soc Interface       Date:  2022-08-10       Impact factor: 4.293

10.  Structural and Functional Studies of H. seropedicae RecA Protein - Insights into the Polymerization of RecA Protein as Nucleoprotein Filament.

Authors:  Wellington C Leite; Carolina W Galvão; Sérgio C Saab; Jorge Iulek; Rafael M Etto; Maria B R Steffens; Sindhu Chitteni-Pattu; Tyler Stanage; James L Keck; Michael M Cox
Journal:  PLoS One       Date:  2016-07-22       Impact factor: 3.240

  10 in total

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