Literature DB >> 7583636

Seeking significance in three-dimensional protein structure comparisons.

K Mizuguchi1, N Go.   

Abstract

What is the significance of three-dimensional structural similarity? This fundamental question still remains unanswered in spite of advances in automatic structure comparison methods that have been made in the last few years. The answer to this question will give us a much deeper insight into the principles of protein architecture.

Mesh：

Substances：

Year:  1995        PMID： 7583636     DOI： 10.1016/0959-440x(95)80100-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  15 in total

1.  CEACAM1 regulates TIM-3-mediated tolerance and exhaustion.

Authors:  Yu-Hwa Huang; Chen Zhu; Yasuyuki Kondo; Ana C Anderson; Amit Gandhi; Andrew Russell; Stephanie K Dougan; Britt-Sabina Petersen; Espen Melum; Thomas Pertel; Kiera L Clayton; Monika Raab; Qiang Chen; Nicole Beauchemin; Paul J Yazaki; Michal Pyzik; Mario A Ostrowski; Jonathan N Glickman; Christopher E Rudd; Hidde L Ploegh; Andre Franke; Gregory A Petsko; Vijay K Kuchroo; Richard S Blumberg
Journal:  Nature       Date:  2014-10-26       Impact factor: 49.962

2.  Visualization of conformational distribution of short to medium size segments in globular proteins and identification of local structural motifs.

Authors:  Kazuyoshi Ikeda; Kentaro Tomii; Tsuyoshi Yokomizo; Daisuke Mitomo; Keiichiro Maruyama; Shinya Suzuki; Junichi Higo
Journal:  Protein Sci       Date:  2005-03-31       Impact factor: 6.725

3.  The structural homology between uteroglobin and the pore-forming domain of colicin A suggests a possible mechanism of action for uteroglobin.

Authors:  X de la Cruz; B Lee
Journal:  Protein Sci       Date:  1996-05       Impact factor: 6.725

4.  Comparison of protein structures using 3D profile alignment.

Authors:  M Suyama; Y Matsuo; K Nishikawa
Journal:  J Mol Evol       Date:  1997       Impact factor: 2.395

5.  BAYESIAN PROTEIN STRUCTURE ALIGNMENT.

Authors:  Abel Rodriguez; Scott C Schmidler
Journal:  Ann Appl Stat       Date:  2014-12-19       Impact factor: 2.083

6.  A new size-independent score for pairwise protein structure alignment and its application to structure classification and nucleic-acid binding prediction.

Authors:  Yuedong Yang; Jian Zhan; Huiying Zhao; Yaoqi Zhou
Journal:  Proteins       Date:  2012-05-25

7.  Rapid comparison of properties on protein surface.

Authors:  Lee Sael; David La; Bin Li; Raif Rustamov; Daisuke Kihara
Journal:  Proteins       Date:  2008-10

8.  Efficient protein structure search using indexing methods.

Authors:  Sungchul Kim; Lee Sael; Hwanjo Yu
Journal:  BMC Med Inform Decis Mak       Date:  2013-04-05       Impact factor: 2.796

9.  Improved protein surface comparison and application to low-resolution protein structure data.

Authors:  Lee Sael; Daisuke Kihara
Journal:  BMC Bioinformatics       Date:  2010-12-14       Impact factor: 3.169

10.  Protein homologous cores and loops: important clues to evolutionary relationships between structurally similar proteins.

Authors:  Thomas Madej; Anna R Panchenko; Jie Chen; Stephen H Bryant
Journal:  BMC Struct Biol       Date:  2007-04-10
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.