Literature DB >> 7583632

The thermodynamics of DNA structures that contain lesions or guanine tetrads.

D S Pilch1, G E Plum, K J Breslauer.   

Abstract

It is becoming increasingly apparent that energetic as well as structural information is required to develop a complete appreciation of the critical interrelationships between structure, energetics, and biological function. Motivated by this recognition, we have reviewed in this article the current state of the thermodynamic databases associated with lesion-containing DNA duplexes and DNA quadruplexes, while highlighting important considerations concerning the methods used to obtain the requisite data.

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Year:  1995        PMID: 7583632     DOI: 10.1016/0959-440x(95)80095-6

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  11 in total

1.  Thermodynamic properties of duplex DNA containing a site-specific d(GpG) intrastrand crosslink formed by an antitumor dinuclear platinum complex.

Authors:  C Hofr; N Farrell; V Brabec
Journal:  Nucleic Acids Res       Date:  2001-05-15       Impact factor: 16.971

2.  DNA energy landscapes via calorimetric detection of microstate ensembles of metastable macrostates and triplet repeat diseases.

Authors:  Jens Völker; Horst H Klump; Kenneth J Breslauer
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-17       Impact factor: 11.205

3.  Thermodynamic stability and energetics of DNA duplexes containing major intrastrand cross-links of second-generation antitumor dinuclear Pt(II) complexes.

Authors:  Jakub Florian; Jana Kasparkova; Nicholas P Farrell; Viktor Brabec
Journal:  J Biol Inorg Chem       Date:  2011-09-06       Impact factor: 3.358

4.  Synthesis of unimolecularly circular G-quadruplexes as prospective molecular probes.

Authors:  Tianyan Zhou; Guoshu Chen; Yifan Wang; Qiang Zhang; Ming Yang; Tianhu Li
Journal:  Nucleic Acids Res       Date:  2004-12-08       Impact factor: 16.971

5.  Influence of cisplatin intrastrand crosslinking on the conformation, thermal stability, and energetics of a 20-mer DNA duplex.

Authors:  N Poklar; D S Pilch; S J Lippard; E A Redding; S U Dunham; K J Breslauer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

6.  Effects of monofunctional adducts of platinum(II) complexes on thermodynamic stability and energetics of DNA duplexes.

Authors:  Vendula Bursova; Jana Kasparkova; Ctirad Hofr; Viktor Brabec
Journal:  Biophys J       Date:  2004-12-01       Impact factor: 4.033

7.  Stereospecific synthesis and characterization of oligodeoxyribonucleotides containing an N2-(1-carboxyethyl)-2'-deoxyguanosine.

Authors:  Huachuan Cao; Yong Jiang; Yinsheng Wang
Journal:  J Am Chem Soc       Date:  2007-09-18       Impact factor: 15.419

8.  T40214/PEI complex: a potent therapeutics for prostate cancer that targets STAT3 signaling.

Authors:  Priya Weerasinghe; Yifei Li; Yongli Guan; Ruiwen Zhang; David J Tweardy; Naijie Jing
Journal:  Prostate       Date:  2008-09-15       Impact factor: 4.104

Review 9.  Applications of isothermal titration calorimetry in biophysical studies of G-quadruplexes.

Authors:  Bruno Pagano; Carlo Andrea Mattia; Concetta Giancola
Journal:  Int J Mol Sci       Date:  2009-07-02       Impact factor: 6.208

10.  Energetic signatures of single base bulges: thermodynamic consequences and biological implications.

Authors:  Conceição A S A Minetti; David P Remeta; Rian Dickstein; Kenneth J Breslauer
Journal:  Nucleic Acids Res       Date:  2009-11-27       Impact factor: 16.971

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