Literature DB >> 7579646

Evidence on close packing and cavities in proteins.

S J Hubbard1, P Argos.   

Abstract

The packing of a protein's constituent atoms and the attendant constraints placed upon them form the basis of many attempts to understand and predict protein structure, stability, folding and even function. Although the significance of packing is yet to be fully comprehended, recent experimental and theoretical investigations have increased our understanding through the description of mutational effects on structure and stability, determination of the limits of packing constraints for both protein folding and structure prediction, and delineation of packing guidelines on the basis of observed cavities in the native protein folds. These advances and allowing protein modellers, engineers and designers to tackle their problems from a more rational perspective.

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Year:  1995        PMID: 7579646     DOI: 10.1016/0958-1669(95)80065-4

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  4 in total

1.  A flexible triangulation method to describe the solvent-accessible surface of biopolymers.

Authors:  A H Juffer; H J Vogel
Journal:  J Comput Aided Mol Des       Date:  1998-05       Impact factor: 3.686

Review 2.  A structural hypothesis for BH4 responsiveness in patients with mild forms of hyperphenylalaninaemia and phenylketonuria.

Authors:  H Erlandsen; R C Stevens
Journal:  J Inherit Metab Dis       Date:  2001-04       Impact factor: 4.982

3.  Revisiting the myths of protein interior: studying proteins with mass-fractal hydrophobicity-fractal and polarizability-fractal dimensions.

Authors:  Anirban Banerji; Indira Ghosh
Journal:  PLoS One       Date:  2009-10-16       Impact factor: 3.240

4.  Evaluation of the structural quality of modeled proteins by using globularity criteria.

Authors:  Susan Costantini; Angelo M Facchiano; Giovanni Colonna
Journal:  BMC Struct Biol       Date:  2007-03-09
  4 in total

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