Literature DB >> 7577690

The use of the STRs HUMTH01, HUMVWA31/A, HUMF13A1, HUMFES/FPS, HUMLPL in forensic application: validation studies and population data for Galicia (NW Spain).

C Pestoni1, M V Lareu, M S Rodríguez, I Muñoz, F Barros, A Carracedo.   

Abstract

The 5 tetranucleotide short tandem repeats, HUMTH01, HUMVWA31/A, HUMF13A1, HUMFES/FPS and HUMLPL were studied using different electrophoretic methods and PCR amplification conditions in order to optimize the typing conditions. A genetic population study in the population of Galicia was carried out and the allele and genotype frequencies are given. Compliance with the Hardy-Weinberg equilibrium was tested using different statistical parameters, with clear advantages resulting in favor of using the exact test (Guo-Thompson method) instead of conventional chi-square methods. Some statistical parameters of forensic interest (PD, CE, h) were also calculated. There were no mutations found in a total of 73 paternal meioses and 101 maternal meioses. Abnormal electrophoretic mobility was found in the AT-rich STR HUMF13A1 under non-denaturing conditions and, therefore, the use of denaturing conditions is absolutely necessary. No "stutter" bands were found, although double peaks in the HUMFES/FPS system were observed in some samples. The advantage of using automated sequencers with fluorescent technology is also reported.

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Year:  1995        PMID: 7577690     DOI: 10.1007/BF01246874

Source DB:  PubMed          Journal:  Int J Legal Med        ISSN: 0937-9827            Impact factor:   2.686


  33 in total

1.  Chain length determination of small double- and single-stranded DNA molecules by polyacrylamide gel electrophoresis.

Authors:  T Maniatis; A Jeffrey; H van deSande
Journal:  Biochemistry       Date:  1975-08-26       Impact factor: 3.162

2.  Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups.

Authors:  A Edwards; H A Hammond; L Jin; C T Caskey; R Chakraborty
Journal:  Genomics       Date:  1992-02       Impact factor: 5.736

3.  Tetranucleotide repeat polymorphism at the human coagulation factor XIII A subunit gene (F13A1).

Authors:  M H Polymeropoulos; D S Rath; H Xiao; C R Merril
Journal:  Nucleic Acids Res       Date:  1991-08-11       Impact factor: 16.971

4.  Population data and forensic efficiency values for the STR systems HumVWA, HumMBP and HumFABP.

Authors:  A Möller; P Wiegand; C Grüschow; S A Seuchter; M P Baur; B Brinkmann
Journal:  Int J Legal Med       Date:  1994       Impact factor: 2.686

5.  Automated DNA profiling employing multiplex amplification of short tandem repeat loci.

Authors:  C P Kimpton; P Gill; A Walton; A Urquhart; E S Millican; M Adams
Journal:  PCR Methods Appl       Date:  1993-08

6.  Report of the European DNA profiling group (EDNAP)--towards standardisation of short tandem repeat (STR) loci.

Authors:  P Gill; C Kimpton; E D'Aloja; J F Andersen; W Bar; B Brinkmann; S Holgersson; V Johnsson; A D Kloosterman; M V Lareu
Journal:  Forensic Sci Int       Date:  1994-03       Impact factor: 2.395

7.  Investigation of the STR locus HUMTH01 using PCR and two electrophoresis formats: UK and Galician Caucasian population surveys and usefulness in paternity investigations.

Authors:  M V Lareu; C P Phillips; A Carracedo; P J Lincoln; D Syndercombe Court; J A Thomson
Journal:  Forensic Sci Int       Date:  1994-05-25       Impact factor: 2.395

8.  The distribution of HLA DQA1 and D1S80 (pMCT118) alleles and genotypes in the populations of Galicia and central Portugal.

Authors:  M V Lareu; I Muñoz; C Pestoni; M S Rodriguez; C Vide; A Carracedo
Journal:  Int J Legal Med       Date:  1993       Impact factor: 2.686

9.  Sequence dependence of the curvature of DNA: a test of the phasing hypothesis.

Authors:  P J Hagerman
Journal:  Biochemistry       Date:  1985-12-03       Impact factor: 3.162

10.  Two new alleles in the tetranucleotide repeat polymorphism at the lipoprotein lipase (LPL) locus.

Authors:  Y I Ahn; M I Kamboh; R E Ferrell
Journal:  Hum Genet       Date:  1992 Sep-Oct       Impact factor: 4.132

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  9 in total

1.  Analysis of the STR loci HUMF13A01, HUMFXIIIB, HUMLIPOL, HUMTH01, HUMTPOX and HUMVWFA31 in a Japanese population.

Authors:  A Nagai; S Yamada; Y Watanabe; Y Bunai; I Ohya
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

2.  Effect of environmental factors on PCR-DNA analysis from dental pulp.

Authors:  A Alvarez García; I Muñoz; C Pestoni; M V Lareu; M S Rodríguez-Calvo; A Carracedo
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

3.  A highly variable STR at the D12S391 locus.

Authors:  M V Lareu; C Pestoni; M Schürenkamp; S Rand; B Brinkmann; A Carracedo
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

4.  Identification of a base pair substitution at the tetranucleotide tandem repeat locus DHFRP2 (AAAC)n in a worldwide survey.

Authors:  A Pérez-Lezaun; F Calafell; E Mateu; D Comas; J Bertranpetit
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

5.  Population study of the STRs HUMCD4 and HUMF13A1 in Catalonia (Northeast Spain).

Authors:  M Gené; E Huguet; P Moreno; J Corbella; D W Schwartz; B Glock
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

6.  Frequencies for five short tandem repeat (STR) systems in a population from north Poland.

Authors:  R Pawlowski; A Maciejewska; R Paszkowska; A Welz
Journal:  Int J Legal Med       Date:  1997       Impact factor: 2.686

7.  Sequence analysis and allelic designation of the two short tandem repeat loci D18S51 and D8S1179.

Authors:  M D Barber; B H Parkin
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

8.  Population data for the STR systems HumTH01, HumVWA and FES/FPS in a population sample from lower Franconia.

Authors:  S Günther; D Patzelt
Journal:  Int J Legal Med       Date:  1996       Impact factor: 2.686

9.  A systematic evaluation of short tandem repeats in lipid candidate genes: riding on the SNP-wave.

Authors:  Claudia Lamina; Margot Haun; Stefan Coassin; Anita Kloss-Brandstätter; Christian Gieger; Annette Peters; Harald Grallert; Konstantin Strauch; Thomas Meitinger; Lyudmyla Kedenko; Bernhard Paulweber; Florian Kronenberg
Journal:  PLoS One       Date:  2014-07-22       Impact factor: 3.240

  9 in total

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