Literature DB >> 7556224

Changing the reaction specificity of a pyridoxal-5'-phosphate-dependent enzyme.

R Graber1, P Kasper, V N Malashkevich, E Sandmeier, P Berger, H Gehring, J N Jansonius, P Christen.   

Abstract

The electron distribution in the coenzyme-substrate adduct of aspartate aminotransferase was changed by replacing active-site Arg386 with alanine and introducing a new arginine residue nearby. [Y225R, R386A]Aspartate aminotransferase decarboxylates L-aspartate to L-alanine (kcat = 0.04 s-1), while its transaminase activity towards dicarboxylic amino acids is decreased by three orders of magnitude (kcat = 0.19 s-1). Molecular-dynamics simulations based on the crystal structure of the mutant enzyme suggest that a new hydrogen bond to the imine N atom of the pyridoxal-5'-phosphate- aspartate adduct and an altered electrostatic potential around its beta-carboxylate group underlie the 650,000-fold increase in the ratio of beta-decarboxylase/transaminase activity.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 7556224     DOI: 10.1111/j.1432-1033.1995.tb20861.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  6 in total

1.  Relative packing groups in template-based structure prediction: cooperative effects of true positive constraints.

Authors:  Ryan Day; Xiaotao Qu; Rosemarie Swanson; Zach Bohannan; Robert Bliss; Jerry Tsai
Journal:  J Comput Biol       Date:  2011-01       Impact factor: 1.479

2.  Role of pro-297 in the catalytic mechanism of sheep liver serine hydroxymethyltransferase.

Authors:  R Talwar; V Leelavathy; J V Krishna Rao; N Appaji Rao; H S Savithri
Journal:  Biochem J       Date:  2000-09-15       Impact factor: 3.857

3.  Imbuing aqueous solubility to amphotericin B and nystatin with a vitamin.

Authors:  Timothy P Day; Diptesh Sil; Nikunj M Shukla; Asokan Anbanandam; Victor W Day; Sunil A David
Journal:  Mol Pharm       Date:  2010-12-17       Impact factor: 4.939

4.  Crystal structure of Homo sapiens kynureninase.

Authors:  Santiago Lima; Roman Khristoforov; Cory Momany; Robert S Phillips
Journal:  Biochemistry       Date:  2007-02-15       Impact factor: 3.162

5.  Characterization of site-directed mutants of residues R58, R59, D116, W340 and R372 in the active site of E. coli cystathionine beta-lyase.

Authors:  Pratik H Lodha; Allison F Jaworski; Susan M Aitken
Journal:  Protein Sci       Date:  2010-03       Impact factor: 6.725

6.  Janus: prediction and ranking of mutations required for functional interconversion of enzymes.

Authors:  Trevor A Addington; Robert W Mertz; Justin B Siegel; James M Thompson; Andrew J Fisher; Vladimir Filkov; Nicholas M Fleischman; Alisa A Suen; Chensong Zhang; Michael D Toney
Journal:  J Mol Biol       Date:  2013-02-06       Impact factor: 5.469

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.