Literature DB >> 7556053

Solution structure of porcine pancreatic phospholipase A2.

B van den Berg1, M Tessari, G H de Haas, H M Verheij, R Boelens, R Kaptein.   

Abstract

The lipolytic enzyme phospholipase A2 (PLA2) is involved in the degradation of high-molecular weight phospholipid aggregates in vivo. The enzyme has very high catalytic activities on aggregated substrates compared with monomeric substrates, a phenomenon called interfacial activation. Crystal structures of PLA2s in the absence and presence of inhibitors are identical, from which it has been concluded that enzymatic conformational changes do not play a role in the mechanism of interfacial activation. The high-resolution NMR structure of porcine pancreatic PLA2 free in solution was determined with heteronuclear multidimensional NMR methodology using doubly labeled 13C, 15N-labeled protein. The solution structure of PLA2 shows important deviations from the crystal structure. In the NMR structure the Ala1 alpha-amino group is disordered and the hydrogen bonding network involving the N-terminus and the active site is incomplete. The disorder observed for the N-terminal region of PLA2 in the solution structure could be related to the low activity of the enzyme towards monomeric substrates. The NMR structure of PLA2 suggests, in contrast to the crystallographic work, that conformational changes do play a role in the interfacial activation of this enzyme.

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Year:  1995        PMID: 7556053      PMCID: PMC394495          DOI: 10.1002/j.1460-2075.1995.tb00086.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  39 in total

1.  X-ray structure of phospholipase A2 complexed with a substrate-derived inhibitor.

Authors:  M M Thunnissen; E Ab; K H Kalk; J Drenth; B W Dijkstra; O P Kuipers; R Dijkman; G H de Haas; H M Verheij
Journal:  Nature       Date:  1990-10-18       Impact factor: 49.962

2.  Inclusion of thermal motion in crystallographic structures by restrained molecular dynamics.

Authors:  P Gros; W F van Gunsteren; W G Hol
Journal:  Science       Date:  1990-09-07       Impact factor: 47.728

3.  Enhanced activity and altered specificity of phospholipase A2 by deletion of a surface loop.

Authors:  O P Kuipers; M M Thunnissen; P de Geus; B W Dijkstra; J Drenth; H M Verheij; G H de Haas
Journal:  Science       Date:  1989-04-07       Impact factor: 47.728

4.  Overcoming the overlap problem in the assignment of 1H NMR spectra of larger proteins by use of three-dimensional heteronuclear 1H-15N Hartmann-Hahn-multiple quantum coherence and nuclear Overhauser-multiple quantum coherence spectroscopy: application to interleukin 1 beta.

Authors:  D Marion; P C Driscoll; L E Kay; P T Wingfield; A Bax; A M Gronenborn; G M Clore
Journal:  Biochemistry       Date:  1989-07-25       Impact factor: 3.162

5.  Interfacial catalysis: the mechanism of phospholipase A2.

Authors:  D L Scott; S P White; Z Otwinowski; W Yuan; M H Gelb; P B Sigler
Journal:  Science       Date:  1990-12-14       Impact factor: 47.728

6.  A comparison of the crystal structures of phospholipase A2 from bovine pancreas and Crotalus atrox venom.

Authors:  R Renetseder; S Brunie; B W Dijkstra; J Drenth; P B Sigler
Journal:  J Biol Chem       Date:  1985-09-25       Impact factor: 5.157

7.  The refined crystal structure of dimeric phospholipase A2 at 2.5 A. Access to a shielded catalytic center.

Authors:  S Brunie; J Bolin; D Gewirth; P B Sigler
Journal:  J Biol Chem       Date:  1985-08-15       Impact factor: 5.157

8.  1H NMR studies of bovine and porcine phospholipase A2: assignment of aromatic resonances and evidence for a conformational equilibrium in solution.

Authors:  J Fisher; W U Primrose; G C Roberts; N Dekker; R Boelens; R Kaptein; A J Slotboom
Journal:  Biochemistry       Date:  1989-07-11       Impact factor: 3.162

9.  A serine protease triad forms the catalytic centre of a triacylglycerol lipase.

Authors:  L Brady; A M Brzozowski; Z S Derewenda; E Dodson; G Dodson; S Tolley; J P Turkenburg; L Christiansen; B Huge-Jensen; L Norskov
Journal:  Nature       Date:  1990-02-22       Impact factor: 49.962

10.  A novel approach for sequential assignment of 1H, 13C, and 15N spectra of proteins: heteronuclear triple-resonance three-dimensional NMR spectroscopy. Application to calmodulin.

Authors:  M Ikura; L E Kay; A Bax
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

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  4 in total

1.  Simultaneous determination of disulphide bridge topology and three-dimensional structure using ambiguous intersulphur distance restraints: possibilities and limitations.

Authors:  J Boisbouvier; M Blackledge; A Sollier; D Marion
Journal:  J Biomol NMR       Date:  2000-03       Impact factor: 2.835

Review 2.  Low molecular weight phospholipases A2 in mammalian brain and neural cells: roles in functions and dysfunctions.

Authors:  Gianfrancesco Goracci; Monica Ferrini; Vincenza Nardicchi
Journal:  Mol Neurobiol       Date:  2010-03-19       Impact factor: 5.590

3.  Modulation of the pharmacological effects of enzymatically-active PLA2 by BTL-2, an isolectin isolated from the Bryothamnion triquetrum red alga.

Authors:  Simone Cb Oliveira; Fabiana V Fonseca; Edson Antunes; Enilton A Camargo; Rafael P Morganti; Ricardo Aparício; Daniela O Toyama; Luís Os Beriam; Eudismar V Nunes; Benildo S Cavada; Celso S Nagano; Alexandre H Sampaio; Kyria S Nascimento; Marcos H Toyama
Journal:  BMC Biochem       Date:  2008-06-06       Impact factor: 4.059

Review 4.  Inflammatory Effects of Bothrops Phospholipases A2: Mechanisms Involved in Biosynthesis of Lipid Mediators and Lipid Accumulation.

Authors:  Vanessa Moreira; Elbio Leiguez; Priscila Motta Janovits; Rodrigo Maia-Marques; Cristina Maria Fernandes; Catarina Teixeira
Journal:  Toxins (Basel)       Date:  2021-12-04       Impact factor: 4.546

  4 in total

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