Literature DB >> 7547867

NMR solution structure of the 32-kDa platelet factor 4 ELR-motif N-terminal chimera: a symmetric tetramer.

K H Mayo1, V Roongta, E Ilyina, R Milius, S Barker, C Quinlan, G La Rosa, T J Daly.   

Abstract

Native human platelet factor 4 (PF4) is a homotetrameric protein (70 residues/subunit) known for its anticoagulant heparin binding activity. 2D 15N--1H HSQC NMR experiments of native PF4 in solution show the presence of conformational heterogeneity consistent with the formation of asymmetric homo-tetramers as observed in the X-ray crystal structure of both human and bovine PF4. A chimeric mutant of PF4 (called PF4-M2) which substitutes the first 11 N-terminal residues for the first eight residues from homologous interleukin-8 forms symmetric homo-tetramers with essentially the same heparin binding activity as native PF4. The solution structure of PF4-M2 has been investigated by using two- and three-dimensional 1H- and 15N-NMR spectroscopy and NOE-restrained simulated annealing molecular dynamics. As with other members of the CXC chemokine family whose structures are known, the PF4-M2 subunit monomer consists of a mostly hydrophobic, triple-stranded antiparallel beta-sheet onto which is folded an amphipathic C-terminal helix and a less periodic N-terminal domain. Although N-terminal substitution with the less acidic interleukin-8 sequence most affects the quarternary structure relative to native PF4 at the AC and AD dimer interfaces, AB dimer stability is weakened as reflected in reduced equilibrium association binding constants.

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Year:  1995        PMID: 7547867     DOI: 10.1021/bi00036a012

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Anginex, a designed peptide that inhibits angiogenesis.

Authors:  A W Griffioen; D W van der Schaft; A F Barendsz-Janson; A Cox; H A Struijker Boudier; H F Hillen; K H Mayo
Journal:  Biochem J       Date:  2001-03-01       Impact factor: 3.857

2.  The solution structure of the anti-HIV chemokine vMIP-II.

Authors:  A C Liwang; Z X Wang; Y Sun; S C Peiper; P J Liwang
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

3.  Backbone and side-chain dynamics of residues in a partially folded beta-sheet peptide from platelet factor-4.

Authors:  V A Daragan; E E Ilyina; C G Fields; G B Fields; K H Mayo
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

4.  Alternative C-terminal helix orientation alters chemokine function: structure of the anti-angiogenic chemokine, CXCL4L1.

Authors:  Je-Hung Kuo; Ya-Ping Chen; Jai-Shin Liu; Alexandre Dubrac; Cathy Quemener; Hervé Prats; Andreas Bikfalvi; Wen-guey Wu; Shih-Che Sue
Journal:  J Biol Chem       Date:  2013-03-27       Impact factor: 5.157

5.  NMR structure and dynamics of monomeric neutrophil-activating peptide 2.

Authors:  H Young; V Roongta; T J Daly; K H Mayo
Journal:  Biochem J       Date:  1999-03-15       Impact factor: 3.857

6.  Beta-sheet is the bioactive conformation of the anti-angiogenic anginex peptide.

Authors:  Ruud P M Dings; Monica M Arroyo; Nathan A Lockwood; Loes I van Eijk; Judy R Haseman; Arjan W Griffioen; Kevin H Mayo
Journal:  Biochem J       Date:  2003-07-01       Impact factor: 3.857

7.  NMR structure determination of the tetramerization domain of the Mnt repressor: An asymmetric alpha-helical assembly in slow exchange.

Authors:  I M Nooren; A V George; R Kaptein; R T Sauer; R Boelens
Journal:  J Biomol NMR       Date:  1999-09       Impact factor: 2.835

Review 8.  Atomic features of an autoantigen in heparin-induced thrombocytopenia (HIT).

Authors:  Zheng Cai; Zhiqiang Zhu; Mark I Greene; Douglas B Cines
Journal:  Autoimmun Rev       Date:  2016-03-09       Impact factor: 9.754

9.  Heparin binding to platelet factor-4. An NMR and site-directed mutagenesis study: arginine residues are crucial for binding.

Authors:  K H Mayo; E Ilyina; V Roongta; M Dundas; J Joseph; C K Lai; T Maione; T J Daly
Journal:  Biochem J       Date:  1995-12-01       Impact factor: 3.857

10.  A surface plasmon resonance-based solution affinity assay for heparan sulfate-binding proteins.

Authors:  Siska Cochran; Cai Ping Li; Vito Ferro
Journal:  Glycoconj J       Date:  2008-11-26       Impact factor: 2.916

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