Literature DB >> 7531249

Hydrogen exchange and protein hydration: the deuteron spin relaxation dispersions of bovine pancreatic trypsin inhibitor and ubiquitin.

V P Denisov1, B Halle.   

Abstract

Water deuteron (2H) spin relaxation was used to study hydrogen exchange, hydration, and protein dynamics in aqueous solutions of the globular proteins bovine pancreatic trypsin inhibitor (BPTI) and ubiquitin. The frequency dispersion of the longitudinal 2H relaxation rate was measured in the pD range 2 to 11 at 27 degrees C. In contrast to the previously reported water 17O relaxation dispersion from the same samples, the 2H dispersion depends strongly on pD. This pD dependence is due to labile protein deuterons in acidic side-chains and surface peptide groups, which exchange rapidly with water deuterons. The pD dependence of the 2H relaxation in BPTI solutions could be quantitatively accounted for in terms of known pK values and hydrogen exchange rate constants. For ubiquitin, labile protein deuterons contribute importantly to the 2H relaxation dispersion even in the neutral pD range. The 2H relaxation data also provided information about the orientational order and internal motion of OD and ND bonds in side-chains and surface peptides. A comparison of the water contribution to the 2H dispersion with the 17O dispersion indicates that one of the four internal water molecules of BPTI, presumably the deeply buried water molecule W122, exchanges more slowly (10(-6) to 10(-4) second) than the other three (10(-8) to 10(-6) second).

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Year:  1995        PMID: 7531249     DOI: 10.1006/jmbi.1994.0056

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  19 in total

1.  Orientational order and dynamics of hydration water in a single crystal of bovine pancreatic trypsin inhibitor.

Authors:  K Venu; L A Svensson; B Halle
Journal:  Biophys J       Date:  1999-08       Impact factor: 4.033

2.  Biomolecular hydration: from water dynamics to hydrodynamics.

Authors:  Bertil Halle; Monika Davidovic
Journal:  Proc Natl Acad Sci U S A       Date:  2003-10-03       Impact factor: 11.205

3.  A model for water motion in crystals of lysozyme based on an incoherent quasielastic neutron-scattering study.

Authors:  C Bon; A J Dianoux; M Ferrand; M S Lehmann
Journal:  Biophys J       Date:  2002-09       Impact factor: 4.033

4.  Crystallographic study of hydration of an internal cavity in engineered proteins with buried polar or ionizable groups.

Authors:  Jamie L Schlessman; Colby Abe; Apostolos Gittis; Daniel A Karp; Michael A Dolan; Bertrand García-Moreno E
Journal:  Biophys J       Date:  2008-01-04       Impact factor: 4.033

5.  The physical state of water in bacterial spores.

Authors:  Erik P Sunde; Peter Setlow; Lars Hederstedt; Bertil Halle
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-05       Impact factor: 11.205

6.  Minor groove hydration of DNA in aqueous solution: sequence-dependent next neighbor effect of the hydration lifetimes in d(TTAA)2 segments measured by NMR spectroscopy.

Authors:  A Jacobson; W Leupin; E Liepinsh; F Otting
Journal:  Nucleic Acids Res       Date:  1996-08-01       Impact factor: 16.971

7.  Dissection of the structural and functional role of a conserved hydration site in RNase T1.

Authors:  U Langhorst; R Loris; V P Denisov; J Doumen; P Roose; D Maes; B Halle; J Steyaert
Journal:  Protein Sci       Date:  1999-04       Impact factor: 6.725

Review 8.  NMR techniques in studying water in biotechnological systems.

Authors:  Victor V Rodin
Journal:  Biophys Rev       Date:  2020-06-15

9.  A new view of water dynamics in immobilized proteins.

Authors:  B Halle; V P Denisov
Journal:  Biophys J       Date:  1995-07       Impact factor: 4.033

10.  Hydration water molecules of nucleotide-free RNase T1 studied by NMR spectroscopy in solution.

Authors:  S Pfeiffer; N Spitzner; F Löhr; H Rüterjans
Journal:  J Biomol NMR       Date:  1998-01       Impact factor: 2.835

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