Literature DB >> 7530654

Influence of obstacles on lipid lateral diffusion: computer simulation of FRAP experiments and application to proteoliposomes and biomembranes.

V Schram1, J F Tocanne, A Lopez.   

Abstract

Fluorescence Recovery After Photobleaching experiments were simulated using a computer approach in which a membrane lipid leaflet was mimicked using a triangular lattice obstructed with randomly distributed immobile and non-overlapping circular obstacles. Influence of the radius r and area fraction c of these obstacles and of the radius R of the observation area on the relative diffusion coefficient D* (Eq. (1)) and mobile fraction M was analyzed. A phenomenological equation relating D* to r and c was established. Fitting this equation to the FRAP data we obtained with the probe NBD-PC embedded in bacteriorhodopsin/egg-PC multilayers suggests that this transmembrane protein rigidifies the surrounding lipid phase over a distance of about 18 A (approximately equal to two lipid layers) from the protein surface. In contrast, analysis of published diffusion constants obtained for lipids in the presence of gramicidin suggests that in terms of lateral diffusion, this relatively small polypeptide does not significantly affect the surrounding lipid phase. With respect to the mobile fraction M, and for point obstacles above the percolation threshold, an increase in R led to a decrease in M which can be associated with the existence of closed domains whose average size and diffusion properties can be determined. Adaptation of this model to the re-interpretation of the FRAP data obtained by Yechiel and Edidin (J Cell Biol (1987) 115:755-760) for the plasma membrane of human fibroblasts consistently leads to the suggestion that the lateral organization of this membrane would be of the confined type, with closed lipid domains of approximately equal to 0.5 microns 2 in area.

Entities:  

Mesh:

Substances:

Year:  1994        PMID: 7530654     DOI: 10.1007/bf00188657

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  34 in total

1.  Monte Carlo simulation studies of lipid order parameter profiles near integral membrane proteins.

Authors:  M M Sperotto; O G Mouritsen
Journal:  Biophys J       Date:  1991-02       Impact factor: 4.033

2.  Monomer-oligomer equilibrium of bacteriorhodopsin in reconstituted proteoliposomes. A freeze-fracture electron microscope study.

Authors:  T Gulik-Krzywicki; M Seigneuret; J L Rigaud
Journal:  J Biol Chem       Date:  1987-11-15       Impact factor: 5.157

Review 3.  Rotational and lateral diffusion of membrane proteins.

Authors:  R J Cherry
Journal:  Biochim Biophys Acta       Date:  1979-12-20

Review 4.  Lateral diffusion of lipids in model and natural membranes.

Authors:  J F Tocanne; L Dupou-Cézanne; A Lopez
Journal:  Prog Lipid Res       Date:  1994       Impact factor: 16.195

5.  Bacteriorhodopsin remains dispersed in fluid phospholipid bilayers over a wide range of bilayer thicknesses.

Authors:  B A Lewis; D M Engelman
Journal:  J Mol Biol       Date:  1983-05-15       Impact factor: 5.469

6.  Lateral diffusion in an archipelago. Effects of impermeable patches on diffusion in a cell membrane.

Authors:  M J Saxton
Journal:  Biophys J       Date:  1982-08       Impact factor: 4.033

7.  Lateral diffusion in an archipelago. The effect of mobile obstacles.

Authors:  M J Saxton
Journal:  Biophys J       Date:  1987-12       Impact factor: 4.033

8.  Critical effects from lipid-protein interaction in membranes. I. Theoretical description.

Authors:  F Jähnig
Journal:  Biophys J       Date:  1981-11       Impact factor: 4.033

Review 9.  Lipid domains and lipid/protein interactions in biological membranes.

Authors:  J F Tocanne; L Cézanne; A Lopez; B Piknova; V Schram; J F Tournier; M Welby
Journal:  Chem Phys Lipids       Date:  1994-09-06       Impact factor: 3.329

10.  Micrometer-scale domains in fibroblast plasma membranes.

Authors:  E Yechiel; M Edidin
Journal:  J Cell Biol       Date:  1987-08       Impact factor: 10.539

View more
  21 in total

1.  Anomalous subdiffusion in fluorescence photobleaching recovery: a Monte Carlo study.

Authors:  M J Saxton
Journal:  Biophys J       Date:  2001-10       Impact factor: 4.033

2.  Anomalous diffusion of major histocompatibility complex class I molecules on HeLa cells determined by single particle tracking.

Authors:  P R Smith; I E Morrison; K M Wilson; N Fernández; R J Cherry
Journal:  Biophys J       Date:  1999-06       Impact factor: 4.033

3.  Anomalous diffusion in a gel-fluid lipid environment: a combined solid-state NMR and obstructed random-walk perspective.

Authors:  Alexandre Arnold; Michaël Paris; Michèle Auger
Journal:  Biophys J       Date:  2004-10       Impact factor: 4.033

4.  Effects of organelle shape on fluorescence recovery after photobleaching.

Authors:  Ivo F Sbalzarini; Anna Mezzacasa; Ari Helenius; Petros Koumoutsakos
Journal:  Biophys J       Date:  2005-06-10       Impact factor: 4.033

5.  Fluorescence-quenching study of percolation and compartmentalization in two-phase lipid bilayers.

Authors:  B Piknová; D Marsh; T E Thompson
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

6.  Lateral diffusion in planar lipid bilayers: a fluorescence recovery after photobleaching investigation of its modulation by lipid composition, cholesterol, or alamethicin content and divalent cations.

Authors:  S Ladha; A R Mackie; L J Harvey; D C Clark; E J Lea; M Brullemans; H Duclohier
Journal:  Biophys J       Date:  1996-09       Impact factor: 4.033

7.  Monte Carlo analysis of obstructed diffusion in three dimensions: application to molecular diffusion in organelles.

Authors:  B P Olveczky; A S Verkman
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

8.  Anomalous diffusion due to binding: a Monte Carlo study.

Authors:  M J Saxton
Journal:  Biophys J       Date:  1996-03       Impact factor: 4.033

9.  Single-particle tracking: the distribution of diffusion coefficients.

Authors:  M J Saxton
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

10.  Phase topology and percolation in two-component lipid bilayers: a monte Carlo approach.

Authors:  F P Coelho; W L Vaz; E Melo
Journal:  Biophys J       Date:  1997-04       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.