Literature DB >> 7530544

Identification of a molecular switch that selects between two crystals forms of bovine pancreatic trypsin inhibitor.

W H Gallagher1, K M Croker.   

Abstract

Two crystals forms of bovine pancreatic trypsin inhibitor are produced between pH 8.39 and 10.13 when crystals are grown at room temperature from solutions of 1.5 M potassium phosphate. Lower pH values favor the form II crystals, whereas higher pH values favor the form III. The transition from one crystal form to the other occurs at pH 9.35. We examined the crystal lattice contacts in both crystal forms and identified an unusual interaction we believe explains these observations. Spanning the crystallographic 2-fold axis in form III crystals, the Lys 41 side-chain amino nitrogens from 2 symmetry-related molecules are only 2.72 A apart, implying they are hydrogen bonded to one another. In form II crystals, the Lys 41 side-chain amino group is protonated and forms a salt bridge with a solvent-derived phosphate group. For the Lys 41 side-chain amino groups to hydrogen bond in form III crystals, at least 1 member of the pair must be deprotonated. The transition that occurs at pH 9.35 marks the pKa for deprotonation. In solution, the pKa for the Lys 41 side chain is around 10.8. The pKa for one of the interacting Lys 41 side chains in form III crystals is therefore shifted downward by about 1.5 pH units. The energy for lowering the pKa value comes from the many additional intermolecular hydrogen bonds that are present in form III crystals: 19 compared to only 8 in form II crystals.

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Year:  1994        PMID: 7530544      PMCID: PMC2142951          DOI: 10.1002/pro.5560030925

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  13 in total

1.  Comparison of orthorhombic and monoclinic crystal structures of HLA-A2.

Authors:  D R Madden; M A Saper; T P Garrett; P J Bjorkman; J L Strominger; D C Wiley
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1989

2.  Structure of form III crystals of bovine pancreatic trypsin inhibitor.

Authors:  A Wlodawer; J Nachman; G L Gilliland; W Gallagher; C Woodward
Journal:  J Mol Biol       Date:  1987-12-05       Impact factor: 5.469

3.  Crystallographic studies of the dynamic properties of lysozyme.

Authors:  P J Artymiuk; C C Blake; D E Grace; S J Oatley; D C Phillips; M J Sternberg
Journal:  Nature       Date:  1979-08-16       Impact factor: 49.962

4.  Influence of solvent accessibility and intermolecular contacts on atomic mobilities in hemerythrins.

Authors:  S Sheriff; W A Hendrickson; R E Stenkamp; L C Sieker; L H Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

5.  Structure of bovine pancreatic trypsin inhibitor. Results of joint neutron and X-ray refinement of crystal form II.

Authors:  A Wlodawer; J Walter; R Huber; L Sjölin
Journal:  J Mol Biol       Date:  1984-12-05       Impact factor: 5.469

6.  On the calculation of pKas in proteins.

Authors:  A S Yang; M R Gunner; R Sampogna; K Sharp; B Honig
Journal:  Proteins       Date:  1993-03

7.  Pancreatic trypsin inhibitor. A new crystal form and its analysis.

Authors:  J Walter; R Huber
Journal:  J Mol Biol       Date:  1983-07-15       Impact factor: 5.469

8.  Comparison of hydrogen exchange rates for bovine pancreatic trypsin inhibitor in crystals and in solution.

Authors:  W Gallagher; F Tao; C Woodward
Journal:  Biochemistry       Date:  1992-05-19       Impact factor: 3.162

9.  Molecular dynamics refinement of a thermitase-eglin-c complex at 1.98 A resolution and comparison of two crystal forms that differ in calcium content.

Authors:  P Gros; C Betzel; Z Dauter; K S Wilson; W G Hol
Journal:  J Mol Biol       Date:  1989-11-20       Impact factor: 5.469

10.  Refined crystal structures of subtilisin novo in complex with wild-type and two mutant eglins. Comparison with other serine proteinase inhibitor complexes.

Authors:  D W Heinz; J P Priestle; J Rahuel; K S Wilson; M G Grütter
Journal:  J Mol Biol       Date:  1991-01-20       Impact factor: 5.469

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  2 in total

1.  Three quaternary structures for a single protein.

Authors:  D B Huang; C F Ainsworth; F J Stevens; M Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-09       Impact factor: 11.205

2.  Reduction of lattice disorder in protein crystals by high-pressure cryocooling.

Authors:  Qingqiu Huang; Sol M Gruner; Chae Un Kim; Yuxin Mao; Xiaochun Wu; Doletha M E Szebenyi
Journal:  J Appl Crystallogr       Date:  2016-02-01       Impact factor: 3.304

  2 in total

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