Literature DB >> 7515042

Cloning and analysis of duplicated rfbM and rfbK genes involved in the formation of GDP-mannose in Escherichia coli O9:K30 and participation of rfb genes in the synthesis of the group I K30 capsular polysaccharide.

P Jayaratne1, D Bronner, P R MacLachlan, C Dodgson, N Kido, C Whitfield.   

Abstract

The rfbO9 gene cluster, which is responsible for the synthesis of the lipopolysaccharide O9 antigen, was cloned from Escherichia coli O9:K30. The gnd gene, encoding 6-phosphogluconate dehydrogenase, was identified adjacent to the rfbO9 cluster, and by DNA sequence analysis the gene order gnd-rfbM-rfbK was established. This order differs from that described for other members of the family Enterobacteriaceae. Nucleotide sequence analysis was used to identify the rfbK and rfbM genes, encoding phosphomannomutase and GDP-mannose pyrophosphorylase, respectively. In members of the family Enterobacteriaceae, these enzymes act sequentially to form GDP-mannose, which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. In the E. coli O9:K30 strain, a duplicated rfbM2-rfbK2 region was detected approximately 3 kbp downstream of rfbM1-rfbK1 and adjacent to the remaining genes of the rfbO9 cluster. The rfbM isogenes differed in upstream flanking DNA but were otherwise highly conserved. In contrast, the rfbK isogenes differed in downstream flanking DNA and in 3'-terminal regions, resulting in slight differences in the sizes of the predicted RfbK proteins. RfbMO9 and RfbKO9 are most closely related to CpsB and CpsG, respectively. These are isozymes of GDP-mannose pyrophosphorylase and phosphomannomutase, respectively, which are thought to be involved in the biosynthesis of the slime polysaccharide colanic acid in E. coli K-12 and Salmonella enterica serovar Typhimurium. An E. coli O-:K30 mutant, strain CWG44, lacks rfbM2-rfbK2 and has adjacent essential rfbO9 sequences deleted. The remaining chromosomal genes are therefore sufficient for GDP-mannose formation and K30 capsular polysaccharide synthesis. A mutant of E. coli CWG44, strain CWG152, was found to lack GDP-mannose pyrophosphorylase and lost the ability to synthesize K30 capsular polysaccharide. Wild-type capsular polysaccharide could be restored in CWG152, by transformation with plasmids containing either rfbM1 or rfbM2. Introduction of a complete rfbO9 gene cluster into CWG152 restored synthesis of both O9 and K30 polysaccharides. Consequently, rfbM is sufficient for the biosynthesis of GDP-mannose for both O antigen and capsular polysaccharide E. coli O9:K30. Analysis of a collection of serotype O8 and O9 isolates by Southern hybridization and PCR amplification experiments demonstrated extensive polymorphism in the rfbM-rfbK region.

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Year:  1994        PMID: 7515042      PMCID: PMC205480          DOI: 10.1128/jb.176.11.3126-3139.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  50 in total

1.  Altered deoxyribonucleotide pools in P2 eductants of Escherichia coli K-12 due to deletion of the dcd gene.

Authors:  J Neuhard; E Thomassen
Journal:  J Bacteriol       Date:  1976-05       Impact factor: 3.490

2.  Transfer and expression of the genetic determinants for O and K antigen synthesis in Escherichia coli O9:K(A)30 and Klebsiella sp. O1:K20, in Escherichia coli K12.

Authors:  D H Laakso; M K Homonylo; S J Wilmot; C Whitfield
Journal:  Can J Microbiol       Date:  1988-08       Impact factor: 2.419

3.  Monoclonal antibodies against the capsular K antigen of Escherichia coli (O9:K30(A):H12): characterisation and use in analysis of K antigen organisation on the cell surface.

Authors:  M K Homonylo; S J Wilmot; J S Lam; L A MacDonald; C Whitfield
Journal:  Can J Microbiol       Date:  1988-10       Impact factor: 2.419

Review 4.  Biosynthesis of bacterial polysaccharide chains composed of repeating units.

Authors:  V N Shibaev
Journal:  Adv Carbohydr Chem Biochem       Date:  1986       Impact factor: 12.200

5.  A sensitive silver stain for detecting lipopolysaccharides in polyacrylamide gels.

Authors:  C M Tsai; C E Frasch
Journal:  Anal Biochem       Date:  1982-01-01       Impact factor: 3.365

6.  Standard reference strains of Escherichia coli from natural populations.

Authors:  H Ochman; R K Selander
Journal:  J Bacteriol       Date:  1984-02       Impact factor: 3.490

7.  Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.

Authors:  C Yanisch-Perron; J Vieira; J Messing
Journal:  Gene       Date:  1985       Impact factor: 3.688

8.  Comparative nucleotide sequence analysis of growth-rate-regulated gnd alleles from natural isolates of Escherichia coli and from Salmonella typhimurium LT-2.

Authors:  G J Barcak; R E Wolf
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

9.  Morphological heterogeneity among Salmonella lipopolysaccharide chemotypes in silver-stained polyacrylamide gels.

Authors:  P J Hitchcock; T M Brown
Journal:  J Bacteriol       Date:  1983-04       Impact factor: 3.490

10.  Procedure for isolation of bacterial lipopolysaccharides from both smooth and rough Pseudomonas aeruginosa and Salmonella typhimurium strains.

Authors:  R P Darveau; R E Hancock
Journal:  J Bacteriol       Date:  1983-08       Impact factor: 3.490

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  17 in total

Review 1.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

2.  Generation of Escherichia coli O9a serotype, a subtype of E. coli O9, by transfer of the wb* gene cluster of Klebsiella O3 into E. coli via recombination.

Authors:  T Sugiyama; N Kido; Y Kato; N Koide; T Yoshida; T Yokochi
Journal:  J Bacteriol       Date:  1998-05       Impact factor: 3.490

3.  Genetic evidence for the role of GDP-mannose in plant ascorbic acid (vitamin C) biosynthesis.

Authors:  P L Conklin; S R Norris; G L Wheeler; E H Williams; N Smirnoff; R L Last
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

Review 4.  Regulation of expression of group IA capsular polysaccharides in Escherichia coli and related extracellular polysaccharides in other bacteria.

Authors:  C Whitfield; W J Keenleyside
Journal:  J Ind Microbiol       Date:  1995-10

5.  The UDP-glucose dehydrogenase of Escherichia coli K-12 displays substrate inhibition by NAD that is relieved by nucleotide triphosphates.

Authors:  Iain L Mainprize; Jordan D Bean; Catrien Bouwman; Matthew S Kimber; Chris Whitfield
Journal:  J Biol Chem       Date:  2013-06-21       Impact factor: 5.157

6.  Polymorphism, duplication, and IS1-mediated rearrangement in the chromosomal his-rfb-gnd region of Escherichia coli strains with group IA and capsular K antigens.

Authors:  J Drummelsmith; P A Amor; C Whitfield
Journal:  J Bacteriol       Date:  1997-05       Impact factor: 3.490

7.  Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence.

Authors:  D L Gibson; A P White; S D Snyder; S Martin; C Heiss; P Azadi; M Surette; W W Kay
Journal:  J Bacteriol       Date:  2006-11       Impact factor: 3.490

8.  Intergeneric transfer and recombination of the 6-phosphogluconate dehydrogenase gene (gnd) in enteric bacteria.

Authors:  K Nelson; R K Selander
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-11       Impact factor: 11.205

9.  Genetic and biochemical analyses of the Pseudomonas aeruginosa Psl exopolysaccharide reveal overlapping roles for polysaccharide synthesis enzymes in Psl and LPS production.

Authors:  Matthew S Byrd; Irina Sadovskaya; Evgueny Vinogradov; Haiping Lu; April B Sprinkle; Stephen H Richardson; Luyan Ma; Brad Ralston; Matthew R Parsek; Erin M Anderson; Joseph S Lam; Daniel J Wozniak
Journal:  Mol Microbiol       Date:  2009-07-29       Impact factor: 3.501

10.  Distribution of the rol gene encoding the regulator of lipopolysaccharide O-chain length in Escherichia coli and its influence on the expression of group I capsular K antigens.

Authors:  C Dodgson; P Amor; C Whitfield
Journal:  J Bacteriol       Date:  1996-04       Impact factor: 3.490

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