Literature DB >> 7514589

The RNA chain elongation rate in Escherichia coli depends on the growth rate.

U Vogel1, K F Jensen.   

Abstract

We determined the rates of mRNA and protein chain elongation on the lacZ gene during exponential growth on different carbon sources. The RNA chain elongation rate was calculated from measurements of the time elapsing between induction of lacZ expression and detection of specific hybridization with a probe near the 3' end of the mRNA. The elongation rate for the transcripts decreased 40% when the growth rate decreased by a factor of 4, and it always correlated with the rate of translation elongation. A similar growth rate dependency was seen for transcription on the infB gene and on a part of the rrnB gene fused to a synthetic, inducible promoter. However, the untranslated RNA chain specified by the rrnB gene was elongated nearly twice as fast as the two mRNA species encoded by infB and lacZ.

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Year:  1994        PMID: 7514589      PMCID: PMC205433          DOI: 10.1128/jb.176.10.2807-2813.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  27 in total

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Authors:  K F Jensen; S Pedersen
Journal:  Microbiol Rev       Date:  1990-06

2.  rRNA transcription rate in Escherichia coli.

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Review 3.  The role of the 'gearbox' in the transcription of essential genes.

Authors:  M Vicente; S R Kushner; T Garrido; M Aldea
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4.  Role of the ribosome in suppressing transcriptional termination at the pyrBI attenuator of Escherichia coli K-12.

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5.  Ribosomal RNA antitermination in vitro: requirement for Nus factors and one or more unidentified cellular components.

Authors:  C L Squires; J Greenblatt; J Li; C Condon; C L Squires
Journal:  Proc Natl Acad Sci U S A       Date:  1993-02-01       Impact factor: 11.205

6.  Ribosomal RNA operon anti-termination. Function of leader and spacer region box B-box A sequences and their conservation in diverse micro-organisms.

Authors:  K L Berg; C Squires; C L Squires
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7.  An unusual correlation between ppGpp pool size and rate of ribosome synthesis during partial pyrimidine starvation of Escherichia coli.

Authors:  U Vogel; S Pedersen; K F Jensen
Journal:  J Bacteriol       Date:  1991-02       Impact factor: 3.490

8.  Transcription mapping of the Escherichia coli chromosome by electron microscopy.

Authors:  S L French; O L Miller
Journal:  J Bacteriol       Date:  1989-08       Impact factor: 3.490

9.  Decreasing transcription elongation rate in Escherichia coli exposed to amino acid starvation.

Authors:  U Vogel; M Sørensen; S Pedersen; K F Jensen; M Kilstrup
Journal:  Mol Microbiol       Date:  1992-08       Impact factor: 3.501

10.  Depletion of functional ribosomal RNA operons in Escherichia coli causes increased expression of the remaining intact copies.

Authors:  C Condon; S French; C Squires; C L Squires
Journal:  EMBO J       Date:  1993-11       Impact factor: 11.598

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  93 in total

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2.  The Influence of Look-Ahead on the Error Rate of Transcription.

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Journal:  Math Model Nat Phenom       Date:  2010-01-27       Impact factor: 4.157

Review 3.  Signal transduction and regulatory mechanisms involved in control of the sigma(S) (RpoS) subunit of RNA polymerase.

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Journal:  Microbiol Mol Biol Rev       Date:  2002-09       Impact factor: 11.056

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Authors:  Frank J Grundy; Tina M Henkin
Journal:  J Bacteriol       Date:  2004-08       Impact factor: 3.490

5.  Cooperation between translating ribosomes and RNA polymerase in transcription elongation.

Authors:  Sergey Proshkin; A Rachid Rahmouni; Alexander Mironov; Evgeny Nudler
Journal:  Science       Date:  2010-04-23       Impact factor: 47.728

6.  Effects of DNA replication on mRNA noise.

Authors:  Joseph R Peterson; John A Cole; Jingyi Fei; Taekjip Ha; Zaida A Luthey-Schulten
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-15       Impact factor: 11.205

Review 7.  Control of rRNA synthesis in Escherichia coli: a systems biology approach.

Authors:  Patrick P Dennis; Mans Ehrenberg; Hans Bremer
Journal:  Microbiol Mol Biol Rev       Date:  2004-12       Impact factor: 11.056

8.  Magnesium controls aptamer-expression platform switching in the SAM-I riboswitch.

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9.  Growth-rate-dependent partitioning of RNA polymerases in bacteria.

Authors:  Stefan Klumpp; Terence Hwa
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-10       Impact factor: 11.205

10.  Comparative transcription profiling and in-depth characterization of plasmid-based and plasmid-free Escherichia coli expression systems under production conditions.

Authors:  Juergen Mairhofer; Theresa Scharl; Karoline Marisch; Monika Cserjan-Puschmann; Gerald Striedner
Journal:  Appl Environ Microbiol       Date:  2013-04-12       Impact factor: 4.792

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