Literature DB >> 7510674

An efficient Shine-Dalgarno sequence but not translation is necessary for lacZ mRNA stability in Escherichia coli.

L A Wagner1, R F Gesteland, T J Dayhuff, R B Weiss.   

Abstract

The 5' ends of many bacterial transcripts are important in determining mRNA stability. A series of Shine-Dalgarno (SD) sequence changes showed that the complementarity of the SD sequence to the anti-SD sequence of 16S rRNA correlates with lacZ mRNA stability in Escherichia coli. Several initiation codon changes showed that an efficient initiation codon is not necessary to maintain lacZ mRNA stability. A stop codon in the 10th codon of lacZ increased mRNA stability. Therefore, ribosomal binding via the SD sequence but not translation of the coding region is necessary to maintain lacZ mRNA stability.

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Year:  1994        PMID： 7510674      PMCID： PMC205255          DOI： 10.1128/jb.176.6.1683-1688.1994

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  39 in total

1.  The Tn10-encoded tetracycline resistance mRNA contains a translational silencer in the 5' nontranslated region.

Authors:  P Flache; R Baumeister; W Hillen
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

2.  Interdependence of translation, transcription and mRNA degradation in the lacZ gene.

Authors:  O Yarchuk; N Jacques; J Guillerez; M Dreyfus
Journal:  J Mol Biol       Date:  1992-08-05       Impact factor: 5.469

3.  Transcription of single-copy hybrid lacZ genes by T7 RNA polymerase in Escherichia coli: mRNA synthesis and degradation can be uncoupled from translation.

Authors:  M Chevrier-Miller; N Jacques; O Raibaud; M Dreyfus
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

4.  Multiple determinants of functional mRNA stability: sequence alterations at either end of the lacZ gene affect the rate of mRNA inactivation.

Authors:  C Petersen
Journal:  J Bacteriol       Date:  1991-04       Impact factor: 3.490

5.  Effect of ermC leader region mutations on induced mRNA stability.

Authors:  K K Hue; D H Bechhofer
Journal:  J Bacteriol       Date:  1991-06       Impact factor: 3.490

6.  Sequential transcription and translation in the lactose operon of Escherichia coli.

Authors:  A Kepes
Journal:  Biochim Biophys Acta       Date:  1967-03-29

7.  Polarity and the degradation of mRNA.

Authors:  D E Morse; C Yanofsky
Journal:  Nature       Date:  1969-10-25       Impact factor: 49.962

8.  Direction of in vivo degradation of tryptophan messenger RNA--a correction.

Authors:  D E Morse; R Mosteller; R F Baker; C Yanofsky
Journal:  Nature       Date:  1969-07-05       Impact factor: 49.962

9.  RNA primary sequence or secondary structure in the translational initiation region controls expression of two variant interferon-beta genes in Escherichia coli.

Authors:  G Gross; C Mielke; I Hollatz; H Blöcker; R Frank
Journal:  J Biol Chem       Date:  1990-10-15       Impact factor: 5.157

10.  Lack of a 5' non-coding region in Tn1721 encoded tetR mRNA is associated with a low efficiency of translation and a short half-life in Escherichia coli.

Authors:  R Baumeister; P Flache; O Melefors; A von Gabain; W Hillen
Journal:  Nucleic Acids Res       Date:  1991-09-11       Impact factor: 16.971
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  19 in total

1.  The initiation codon affects ribosome binding and translational efficiency in Escherichia coli of cI mRNA with or without the 5' untranslated leader.

Authors:  S M O'Donnell; G R Janssen
Journal:  J Bacteriol       Date:  2001-02       Impact factor: 3.490

2.  Hfq (HF1) stimulates ompA mRNA decay by interfering with ribosome binding.

Authors:  O Vytvytska; I Moll; V R Kaberdin; A von Gabain; U Bläsi
Journal:  Genes Dev       Date:  2000-05-01       Impact factor: 11.361

3.  cry1Aa lacks stability elements at its 5'-UTR but integrity of its transcription terminator is critical to prevent decay of its transcript.

Authors:  Jorge Humberto Ramírez-Prado; Eva Isabel Martínez-Márquez; Gabriela Olmedo-Alvarez
Journal:  Curr Microbiol       Date:  2006-06-06       Impact factor: 2.188

4.  Design and optimization of short DNA sequences that can be used as 5' fusion partners for high-level expression of heterologous genes in Escherichia coli.

Authors:  Veronika Kucharova; Jørgen Skancke; Trygve Brautaset; Svein Valla
Journal:  Appl Environ Microbiol       Date:  2013-08-23       Impact factor: 4.792

5.  Composability of regulatory sequences controlling transcription and translation in Escherichia coli.

Authors:  Sriram Kosuri; Daniel B Goodman; Guillaume Cambray; Vivek K Mutalik; Yuan Gao; Adam P Arkin; Drew Endy; George M Church
Journal:  Proc Natl Acad Sci U S A       Date:  2013-08-07       Impact factor: 11.205

6.  Accumulation of a mRNA decay intermediate by ribosomal pausing at a stop codon.

Authors:  A Björnsson; L A Isaksson
Journal:  Nucleic Acids Res       Date:  1996-05-01       Impact factor: 16.971

Review 7.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

8.  mRNA stabilization by the ompA 5' untranslated region: two protective elements hinder distinct pathways for mRNA degradation.

Authors:  T E Arnold; J Yu; J G Belasco
Journal:  RNA       Date:  1998-03       Impact factor: 4.942

9.  Membrane topology analysis of Escherichia coli K-12 Mtr permease by alkaline phosphatase and beta-galactosidase fusions.

Authors:  J P Sarsero; A J Pittard
Journal:  J Bacteriol       Date:  1995-01       Impact factor: 3.490

10.  AU-rich sequences within 5' untranslated leaders enhance translation and stabilize mRNA in Escherichia coli.

Authors:  Anastassia V Komarova; Ludmila S Tchufistova; Marc Dreyfus; Irina V Boni
Journal:  J Bacteriol       Date:  2005-02       Impact factor: 3.490
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