Literature DB >> 7505669

NusG alters rho-dependent termination of transcription in vitro independent of kinetic coupling.

K W Nehrke1, F Zalatan, T Platt.   

Abstract

To complement the recent discovery that rho-dependent termination in E. coli requires nusG protein in vivo, we have tested the effect of purified nusG protein on rho-dependent termination in vitro. With the well-characterized trp t' terminator of E. coli, and no other proteins than E. coli RNA polymerase and rho factor, nusG causes a proximal shift in the terminated RNA endpoints, compared to the endpoints generated by rho alone. The presence of nusG also enhances rho-mediated termination on partially defective mutant trp t' templates. We rule out explanations such as a change in the kinetic coupling between rho and RNA polymerase or a nusG-mediated increase in the affinity of rho for RNA. We also detect no difference in the helicase rate of rho in the presence of nusG. Even assays with completely stalled and isolated ternary complexes indicate that rho is able to effect the release of RNA with the assistance of nusG at points preceding the most proximal release sites observed in the absence of nusG. Our observations support a model in which nusG acts as a component of the transcription complex, possibly interacting with both rho and RNA polymerase as it governs accessibility to the nascent transcript.

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Year:  1993        PMID: 7505669      PMCID: PMC6081637     

Source DB:  PubMed          Journal:  Gene Expr        ISSN: 1052-2166


  44 in total

1.  A consensus motif common to all Rho-dependent prokaryotic transcription terminators.

Authors:  P Alifano; F Rivellini; D Limauro; C B Bruni; M S Carlomagno
Journal:  Cell       Date:  1991-02-08       Impact factor: 41.582

2.  Footprinting analysis of mammalian RNA polymerase II along its transcript: an alternative view of transcription elongation.

Authors:  G A Rice; C M Kane; M J Chamberlin
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

3.  Escherichia coli transcription termination factor rho has a two-domain structure in its activated form.

Authors:  D G Bear; C L Andrews; J D Singer; W D Morgan; R A Grant; P H von Hippel; T Platt
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

4.  Transcription termination factor rho is an RNA-DNA helicase.

Authors:  C A Brennan; A J Dombroski; T Platt
Journal:  Cell       Date:  1987-03-27       Impact factor: 41.582

5.  An elongation control particle containing the N gene transcriptional antitermination protein of bacteriophage lambda.

Authors:  R J Horwitz; J Li; J Greenblatt
Journal:  Cell       Date:  1987-11-20       Impact factor: 41.582

6.  Enzymic synthesis of RNA from T7 DNA.

Authors:  J P Richardson
Journal:  J Mol Biol       Date:  1966-10-28       Impact factor: 5.469

7.  RNA sequence and secondary structure requirements for rho-dependent transcription termination.

Authors:  W D Morgan; D G Bear; B L Litchman; P H von Hippel
Journal:  Nucleic Acids Res       Date:  1985-05-24       Impact factor: 16.971

Review 8.  The structure and mechanism of action of bacterial DNA-dependent RNA polymerase.

Authors:  S A Kumar
Journal:  Prog Biophys Mol Biol       Date:  1981       Impact factor: 3.667

9.  Enhancement of transcription termination factor rho activity with potassium glutamate.

Authors:  L L Zou; J P Richardson
Journal:  J Biol Chem       Date:  1991-06-05       Impact factor: 5.157

10.  Suppression of transcription termination by phage lambda.

Authors:  D F Ward; M E Gottesman
Journal:  Science       Date:  1982-05-28       Impact factor: 47.728

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  17 in total

1.  Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antitermination.

Authors:  M Torres; C Condon; J M Balada; C Squires; C L Squires
Journal:  EMBO J       Date:  2001-07-16       Impact factor: 11.598

2.  Crystal structures of transcription factor NusG in light of its nucleic acid- and protein-binding activities.

Authors:  Thomas Steiner; Jens T Kaiser; Snezan Marinkoviç; Robert Huber; Markus C Wahl
Journal:  EMBO J       Date:  2002-09-02       Impact factor: 11.598

Review 3.  RNA polymerase elongation factors.

Authors:  Jeffrey W Roberts; Smita Shankar; Joshua J Filter
Journal:  Annu Rev Microbiol       Date:  2008       Impact factor: 15.500

4.  The Sm-like RNA chaperone Hfq mediates transcription antitermination at Rho-dependent terminators.

Authors:  Makhlouf Rabhi; Olivier Espéli; Annie Schwartz; Bastien Cayrol; A Rachid Rahmouni; Véronique Arluison; Marc Boudvillain
Journal:  EMBO J       Date:  2011-06-14       Impact factor: 11.598

5.  Isolation, purification, and in vitro characterization of recessive-lethal-mutant RNA polymerases from Escherichia coli.

Authors:  P L Tavormina; R Landick; C A Gross
Journal:  J Bacteriol       Date:  1996-09       Impact factor: 3.490

Review 6.  Tuning the sequence specificity of a transcription terminator.

Authors:  Michael R Lawson; James M Berger
Journal:  Curr Genet       Date:  2019-02-09       Impact factor: 3.886

7.  NusG is required to overcome a kinetic limitation to Rho function at an intragenic terminator.

Authors:  C M Burns; J P Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-23       Impact factor: 11.205

8.  Escherichia coli NusG protein stimulates transcription elongation rates in vivo and in vitro.

Authors:  E Burova; S C Hung; V Sagitov; B L Stitt; M E Gottesman
Journal:  J Bacteriol       Date:  1995-03       Impact factor: 3.490

9.  Transcription is regulated by NusA:NusG interaction.

Authors:  Martin Strauß; Christal Vitiello; Kristian Schweimer; Max Gottesman; Paul Rösch; Stefan H Knauer
Journal:  Nucleic Acids Res       Date:  2016-05-12       Impact factor: 16.971

10.  Binding and translocation of termination factor rho studied at the single-molecule level.

Authors:  Daniel J Koslover; Furqan M Fazal; Rachel A Mooney; Robert Landick; Steven M Block
Journal:  J Mol Biol       Date:  2012-08-09       Impact factor: 5.469

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