Literature DB >> 7494266

Hepatitis D virus RNA editing: specific modification of adenosine in the antigenomic RNA.

J L Casey1, J L Gerin.   

Abstract

RNA editing plays a central role in the life cycle of hepatitis D virus (HDV), a subviral human pathogen. Previous studies (J.L. Casey, K.F. Bergmann, T.L. Brown, and J.L. Gerin, Proc. Natl. Acad. Sci USA 89:7149-7153, 1992; H. Zheng, T.-B. Fu, D. Lazinski, and J. Taylor, J. Virol. 66:4693-4697, 1992) had concluded that the genomic RNA of HDV was the target for RNA editing and that the editing reaction was a conversion of U to C. However, we show here that the antigenomic RNA of HDV is in fact the target for HDV RNA editing, which is therefore a conversion of A to G. This result is verified by using an assay specific for editing on the antigenomic RNA and by analyzing the editing of site-directed mutant RNAs in transfected cells and in cell extracts. Because editing occurs in the absence of viral antigens and the specificity for the HDV editing target site is present even in extracts from Drosophila cells, it is likely that HDV RNA is edited by one or more cellular factors that are conserved among higher eukaryotes. These results raise the likelihood that double-stranded RNA adenosine deaminase specifically edits HDV antigenomic RNA.

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Year:  1995        PMID: 7494266      PMCID: PMC189698     

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  34 in total

1.  RNA editing of AMPA receptor subunit GluR-B: a base-paired intron-exon structure determines position and efficiency.

Authors:  M Higuchi; F N Single; M Köhler; B Sommer; R Sprengel; P H Seeburg
Journal:  Cell       Date:  1993-12-31       Impact factor: 41.582

2.  Purification and characterization of double-stranded RNA adenosine deaminase from bovine nuclear extracts.

Authors:  U Kim; T L Garner; T Sanford; D Speicher; J M Murray; K Nishikura
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

3.  Determinants of RNA editing in hepatitis delta virus.

Authors:  J L Casey; K F Bergmann; T L Brown; J L Gerin
Journal:  Prog Clin Biol Res       Date:  1993

4.  Purification and properties of double-stranded RNA-specific adenosine deaminase from calf thymus.

Authors:  M A O'Connell; W Keller
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

5.  Molecular cloning of cDNA for double-stranded RNA adenosine deaminase, a candidate enzyme for nuclear RNA editing.

Authors:  U Kim; Y Wang; T Sanford; Y Zeng; K Nishikura
Journal:  Proc Natl Acad Sci U S A       Date:  1994-11-22       Impact factor: 11.205

6.  Expression of hepatitis delta virus RNA deletions: cis and trans requirements for self-cleavage, ligation, and RNA packaging.

Authors:  D W Lazinski; J M Taylor
Journal:  J Virol       Date:  1994-05       Impact factor: 5.103

7.  Relating structure to function in the hepatitis delta virus antigen.

Authors:  D W Lazinski; J M Taylor
Journal:  J Virol       Date:  1993-05       Impact factor: 5.103

8.  A genotype of hepatitis D virus that occurs in northern South America.

Authors:  J L Casey; T L Brown; E J Colan; F S Wignall; J L Gerin
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

9.  Purification of the Xenopus laevis double-stranded RNA adenosine deaminase.

Authors:  R F Hough; B L Bass
Journal:  J Biol Chem       Date:  1994-04-01       Impact factor: 5.157

10.  Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase.

Authors:  A G Polson; B L Bass
Journal:  EMBO J       Date:  1994-12-01       Impact factor: 11.598

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  81 in total

1.  RNA-Dependent replication and transcription of hepatitis delta virus RNA involve distinct cellular RNA polymerases.

Authors:  L E Modahl; T B Macnaughton; N Zhu; D L Johnson; M M Lai
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

2.  Increased RNA editing and inhibition of hepatitis delta virus replication by high-level expression of ADAR1 and ADAR2.

Authors:  Geetha C Jayan; John L Casey
Journal:  J Virol       Date:  2002-04       Impact factor: 5.103

Review 3.  RNA editing by adenosine deaminases that act on RNA.

Authors:  Brenda L Bass
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

4.  Elevated activity of the large form of ADAR1 in vivo: very efficient RNA editing occurs in the cytoplasm.

Authors:  Swee Kee Wong; Shuji Sato; David W Lazinski
Journal:  RNA       Date:  2003-05       Impact factor: 4.942

5.  By inhibiting replication, the large hepatitis delta antigen can indirectly regulate amber/W editing and its own expression.

Authors:  Shuji Sato; Cromwell Cornillez-Ty; David W Lazinski
Journal:  J Virol       Date:  2004-08       Impact factor: 5.103

6.  A survey of RNA editing in human brain.

Authors:  Matthew Blow; P Andrew Futreal; Richard Wooster; Michael R Stratton
Journal:  Genome Res       Date:  2004-11-15       Impact factor: 9.043

Review 7.  Hydroxylation and translational adaptation to stress: some answers lie beyond the STOP codon.

Authors:  M J Katz; L Gándara; A L De Lella Ezcurra; P Wappner
Journal:  Cell Mol Life Sci       Date:  2016-02-13       Impact factor: 9.261

8.  A prenylation inhibitor prevents production of infectious hepatitis delta virus particles.

Authors:  Bruno B Bordier; Patricia L Marion; Kazuo Ohashi; Mark A Kay; Harry B Greenberg; John L Casey; Jeffrey S Glenn
Journal:  J Virol       Date:  2002-10       Impact factor: 5.103

9.  Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes.

Authors:  Michael F Lin; Joseph W Carlson; Madeline A Crosby; Beverley B Matthews; Charles Yu; Soo Park; Kenneth H Wan; Andrew J Schroeder; L Sian Gramates; Susan E St Pierre; Margaret Roark; Kenneth L Wiley; Rob J Kulathinal; Peili Zhang; Kyl V Myrick; Jerry V Antone; Susan E Celniker; William M Gelbart; Manolis Kellis
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

10.  Effects of conserved RNA secondary structures on hepatitis delta virus genotype I RNA editing, replication, and virus production.

Authors:  Geetha C Jayan; John L Casey
Journal:  J Virol       Date:  2005-09       Impact factor: 5.103

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