Literature DB >> 7493023

An integrated metric physical map of human chromosome 19.

L K Ashworth1, M A Batzer, B Brandriff, E Branscomb, P de Jong, E Garcia, J A Garnes, L A Gordon, J E Lamerdin, G Lennon, H Mohrenweiser, A S Olsen, T Slezak, A V Carrano.   

Abstract

A metric physical map of human chromosome 19 has been generated. The foundation of the map is sets of overlapping cosmids (contigs) generated by automated fingerprinting spanning over 95% of the euchromatin, about 50 megabases (Mb). Distances between selected cosmid clones were estimated using fluorescence in situ hybridization in sperm pronuclei, providing both order and distance between contigs. An average inter-marker separation of 230 kb has been obtained across the non-centromeric portion of the chromosome. Various types of larger insert clones were used to span gaps between contigs. Currently, the map consists of 51 'islands' containing multiple clone types, whose size, order and relative distance are known. Over 450 genes, genetic markers, sequence tagged sites (STSs), anonymous cDNAs, and other markers have been localized. In addition, EcoRI restriction maps have been generated for > 41 Mb (approximately 83%) of the chromosome.

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Year:  1995        PMID: 7493023     DOI: 10.1038/ng1295-422

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  25 in total

1.  An integrated physical map for the short arm of human chromosome 5.

Authors:  E T Peterson; R Sutherland; D L Robinson; L Chasteen; M Gersh; J Overhauser; L L Deaven; R K Moyzis; D L Grady
Journal:  Genome Res       Date:  1999-12       Impact factor: 9.043

2.  Somatic mutations in the STK11/LKB1 gene are uncommon in rare gynecological tumor types associated with Peutz-Jegher's syndrome.

Authors:  D C Connolly; H Katabuchi; W A Cliby; K R Cho
Journal:  Am J Pathol       Date:  2000-01       Impact factor: 4.307

3.  Comparative maps of human 19p13.3 and mouse chromosome 10 allow identification of sequences at evolutionary breakpoints.

Authors:  R Puttagunta; L A Gordon; G E Meyer; D Kapfhamer; J E Lamerdin; P Kantheti; K M Portman; W K Chung; D E Jenne; A S Olsen; M Burmeister
Journal:  Genome Res       Date:  2000-09       Impact factor: 9.043

4.  Two pacemaker channels from human heart with profoundly different activation kinetics.

Authors:  A Ludwig; X Zong; J Stieber; R Hullin; F Hofmann; M Biel
Journal:  EMBO J       Date:  1999-05-04       Impact factor: 11.598

5.  Diamond-Blackfan anaemia in a girl with a de novo balanced reciprocal X;19 translocation.

Authors:  P Gustavsson; G Skeppner; B Johansson; T Berg; L Gordon; A Kreuger; N Dahl
Journal:  J Med Genet       Date:  1997-09       Impact factor: 6.318

6.  Comparative analysis of chicken chromosome 28 provides new clues to the evolutionary fragility of gene-rich vertebrate regions.

Authors:  Laurie Gordon; Shan Yang; Mary Tran-Gyamfi; Dan Baggott; Mari Christensen; Aaron Hamilton; Richard Crooijmans; Martien Groenen; Susan Lucas; Ivan Ovcharenko; Lisa Stubbs
Journal:  Genome Res       Date:  2007-10-05       Impact factor: 9.043

7.  The mouse cyclin E maps to chromosome 7.

Authors:  D K Johnson; L J Stubbs; J A DeLoia
Journal:  Mamm Genome       Date:  1996-03       Impact factor: 2.957

8.  Identification of a common low density lipoprotein receptor mutation (R329X) in the south of England: complete linkage disequilibrium with an allele of microsatellite D19S394.

Authors:  I N Day; L Haddad; S D O'Dell; L B Day; R A Whittall; S E Humphries
Journal:  J Med Genet       Date:  1997-02       Impact factor: 6.318

9.  Somatic deletion of the 5' ends of both the COL4A5 and COL4A6 genes in a sporadic leiomyoma of the esophagus.

Authors:  L Heidet; E Boye; Y Cai; Y Sado; X Zhang; J F Fléjou; F Fékété; Y Ninomiya; M C Gubler; C Antignac
Journal:  Am J Pathol       Date:  1998-03       Impact factor: 4.307

10.  Multiple-complete-digest restriction fragment mapping: generating sequence-ready maps for large-scale DNA sequencing.

Authors:  G K Wong; J Yu; E C Thayer; M V Olson
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

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