Literature DB >> 7492562

Kinetics of inorganic phosphate release during the interaction of p21ras with the GTPase-activating proteins, p120-GAP and neurofibromin.

A E Nixon1, M Brune, P N Lowe, M R Webb.   

Abstract

The rate of GTP hydrolysis on p21ras is accelerated by approximately 10(5) times by the catalytic domains of GTPase-activating proteins (GAPs), p120-GAP (GAP-344) or neurofibromin (NF1-334). The kinetic mechanism of this activation has been investigated by following the release of inorganic phosphate (Pi), using a fluorescent probe that is sensitive to Pi [Brune, M., Hunter, J., Corrie, J. E. T., & Webb, M. R. (1994) Biochemistry 33, 8262-8271]. Measurements were made in real time with a stopped-flow apparatus, in which the p21ras complex with the 2',3'-methanthraniloyl analogue of GTP (mantGTP) was mixed with the GAP in the presence of this Pi probe. The results show that Pi release is fast and that the overall hydrolysis is controlled by the cleavage itself or a conformational change preceding the cleavage. The time courses were single exponentials over a range of [GAP-344] and were modeled to show that a single step controlled Pi release. The maximum rate constant was 15 s-1 (all data at 30 degrees C, pH 7.6, low ionic strength) in experiments in which GAP-344 underwent a single turnover, compared with 5 s-1 for multiple-turnover experiments, and possible causes of this discrepancy were investigated and discussed. With NF1-334 the time courses were more complex, showing a lag prior to rapid release of Pi. The results were consistent with a Kd of 0.04 microM for NF1-344 affinity is some 3 orders of magnitude tighter than that of GAP-344.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1995        PMID: 7492562     DOI: 10.1021/bi00047a026

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Late events of translation initiation in bacteria: a kinetic analysis.

Authors:  J Tomsic; L A Vitali; T Daviter; A Savelsbergh; R Spurio; P Striebeck; W Wintermeyer; M V Rodnina; C O Gualerzi
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

2.  Biochemical characterization of the Ran-RanBP1-RanGAP system: are RanBP proteins and the acidic tail of RanGAP required for the Ran-RanGAP GTPase reaction?

Authors:  Michael J Seewald; Astrid Kraemer; Marian Farkasovsky; Carolin Körner; Alfred Wittinghofer; Ingrid R Vetter
Journal:  Mol Cell Biol       Date:  2003-11       Impact factor: 4.272

3.  The small GTPases K-Ras, N-Ras, and H-Ras have distinct biochemical properties determined by allosteric effects.

Authors:  Christian W Johnson; Derion Reid; Jillian A Parker; Shores Salter; Ryan Knihtila; Petr Kuzmic; Carla Mattos
Journal:  J Biol Chem       Date:  2017-06-19       Impact factor: 5.157

4.  Kinetic analysis of GTP hydrolysis catalysed by the Arf1-GTP-ASAP1 complex.

Authors:  Ruibai Luo; Bijan Ahvazi; Diana Amariei; Deborah Shroder; Beatriz Burrola; Wolfgang Losert; Paul A Randazzo
Journal:  Biochem J       Date:  2007-03-15       Impact factor: 3.857

5.  Monitoring the GAP catalyzed H-Ras GTPase reaction at atomic resolution in real time.

Authors:  C Allin; M R Ahmadian; A Wittinghofer; K Gerwert
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

6.  A complementary pair of rapid molecular screening assays for RecA activities.

Authors:  Andrew M Lee; Tim J Wigle; Scott F Singleton
Journal:  Anal Biochem       Date:  2007-04-20       Impact factor: 3.365

7.  Kinetic analysis of Arf GAP1 indicates a regulatory role for coatomer.

Authors:  Ruibai Luo; Paul A Randazzo
Journal:  J Biol Chem       Date:  2008-06-09       Impact factor: 5.157

8.  Measurement of Nucleotide Hydrolysis Using Fluorescent Biosensors for Phosphate.

Authors:  Simone Kunzelmann
Journal:  Methods Mol Biol       Date:  2021

9.  ADP-ribosylation factor 1 transiently activates high-affinity adaptor protein complex AP-1 binding sites on Golgi membranes.

Authors:  Y Zhu; L M Traub; S Kornfeld
Journal:  Mol Biol Cell       Date:  1998-06       Impact factor: 4.138

10.  Structural analysis of the GAP-related domain from neurofibromin and its implications.

Authors:  K Scheffzek; M R Ahmadian; L Wiesmüller; W Kabsch; P Stege; F Schmitz; A Wittinghofer
Journal:  EMBO J       Date:  1998-08-03       Impact factor: 11.598

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