Literature DB >> 7479935

The genetic link between the Chinese bamboo partridge (Bambusicola thoracica) and the chicken and junglefowls of the genus Gallus.

A Fumihito1, T Miyake, M Takada, S Ohno, N Kondo.   

Abstract

Further comparison of mitochondrial control-region DNA base sequences of 16 avian species belonging to the subfamily Phasianinae revealed the following: (i) Generalized perdicine birds (quails and partridges) are of ancient lineages. Even the closest pair, the common quail (Coturnix coturnix japonica) and the Chinese bamboo partridge (Bambusicola thoracica), maintained only 85.71% identity. (ii) The 12 species of phasianine birds previously and presently studied belonged to three distinct branches. The first branch was made exclusively of members of the genus Gallus, while the second branch was made of pheasants of the genera Phasianus, Chrysolophus, and Syrmaticus. Gallopheasants of the genus Lophura were distant cousins to these pheasants. The great argus (Argusianus argus) and peafowls of the genus Pavo constituted the third branch. The position of peacock-pheasants of the genus Polyplectron in the third branch was similar to that of the genus Lophura in the second branch. Members of the fourth phasianine branch, such as tragopans and monals, were not included in the present study. (iii) The one perdicine species, Bambusicola thoracica, was more closely related to phasianine genera Gallus and Pavo than to members of other perdicine genera. The above might indicate that Bambusicola belong to one-stem perdicine lineage that later splits into two sublineages that yielded phasianine birds, one evolving to Gallus, and the other differentiating toward Pavo and its allies.

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Year:  1995        PMID: 7479935      PMCID: PMC40569          DOI: 10.1073/pnas.92.24.11053

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  5 in total

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Authors:  P Desjardins; R Morais
Journal:  J Mol Evol       Date:  1991-02       Impact factor: 2.395

2.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

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Authors:  M Kimura
Journal:  Proc Natl Acad Sci U S A       Date:  1981-01       Impact factor: 11.205

4.  Estimation of average number of nucleotide substitutions when the rate of substitution varies with nucleotide.

Authors:  T Gojobori; K Ishii; M Nei
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

5.  One subspecies of the red junglefowl (Gallus gallus gallus) suffices as the matriarchic ancestor of all domestic breeds.

Authors:  A Fumihito; T Miyake; S Sumi; M Takada; S Ohno; N Kondo
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

  5 in total
  12 in total

1.  Monophyletic origin and unique dispersal patterns of domestic fowls.

Authors:  A Fumihito; T Miyake; M Takada; R Shingu; T Endo; T Gojobori; N Kondo; S Ohno
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

2.  A mitogenomic perspective on the ancient, rapid radiation in the Galliformes with an emphasis on the Phasianidae.

Authors:  Yong-Yi Shen; Lu Liang; Yan-Bo Sun; Bi-Song Yue; Xiao-Jun Yang; Robert W Murphy; Ya-Ping Zhang
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3.  The origin and genetic variation of domestic chickens with special reference to junglefowls Gallus g. gallus and G. varius.

Authors:  Hiromi Sawai; Hie Lim Kim; Kaori Kuno; Sayaka Suzuki; Hideo Gotoh; Masaru Takada; Naoyuki Takahata; Yoko Satta; Fumihito Akishinonomiya
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4.  Resolution of the phylogenetic position of the Congo peafowl, Afropavo congensis: a biogeographic and evolutionary enigma.

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5.  Assessing phylogenetic relationships among galliformes: a multigene phylogeny with expanded taxon sampling in Phasianidae.

Authors:  Ning Wang; Rebecca T Kimball; Edward L Braun; Bin Liang; Zhengwang Zhang
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Journal:  BMC Genomics       Date:  2015-02-05       Impact factor: 3.969

8.  Ancient DNA resolves identity and phylogeny of New Zealand's extinct and living quail (Coturnix sp.).

Authors:  Mark Seabrook-Davison; Leon Huynen; David M Lambert; Dianne H Brunton
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9.  Genetic evidence from Indian red jungle fowl corroborates multiple domestication of modern day chicken.

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10.  The updated phylogenies of the phasianidae based on combined data of nuclear and mitochondrial DNA.

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Journal:  PLoS One       Date:  2014-04-18       Impact factor: 3.240

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