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Literature DB >> 7407056

Pentalysine-deoxyribonucleic acid interactions: a model for the general effects of ion concentrations on the interactions of proteins with nucleic acids.

T M Lohman, P L deHaseth, M T Record.

Abstract

Entities: Chemical

Mesh：

Substances：

Year: 1980 PMID： 7407056 DOI： 10.1021/bi00556a017

Source DB: PubMed Journal: Biochemistry ISSN： 0006-2960 Impact factor: 3.162

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45 in total

1. Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

Authors: Harold D Kim; G Ulrich Nienhaus; Taekjip Ha; Jeffrey W Orr; James R Williamson; Steven Chu
Journal: Proc Natl Acad Sci U S A Date: 2002-04-02 Impact factor: 11.205

2. Nonspecific DNA binding and bending by HUαβ: interfaces of the three binding modes characterized by salt-dependent thermodynamics.

Authors: Junseock Koh; Irina Shkel; Ruth M Saecker; M Thomas Record
Journal: J Mol Biol Date: 2011-04-12 Impact factor: 5.469

3. Using pyrene-labeled HIV-1 TAR to measure RNA-small molecule binding.

Authors: Kenneth F Blount; Yitzhak Tor
Journal: Nucleic Acids Res Date: 2003-10-01 Impact factor: 16.971

4. Specific versus nonspecific binding of cationic PNAs to duplex DNA.

Authors: Ayome Abibi; Ekaterina Protozanova; Vadim V Demidov; Maxim D Frank-Kamenetskii
Journal: Biophys J Date: 2004-05 Impact factor: 4.033

5. Thermodynamic characterization of binding Oxytricha nova single strand telomere DNA with the alpha protein N-terminal domain.

Authors: Pawel Buczek; Martin P Horvath
Journal: J Mol Biol Date: 2006-04-25 Impact factor: 5.469

Pentalysine-deoxyribonucleic acid interactions: a model for the general effects of ion concentrations on the interactions of proteins with nucleic acids.

1. Mg2+-dependent conformational change of RNA studied by fluorescence correlation and FRET on immobilized single molecules.

2. Nonspecific DNA binding and bending by HUαβ: interfaces of the three binding modes characterized by salt-dependent thermodynamics.

3. Using pyrene-labeled HIV-1 TAR to measure RNA-small molecule binding.

4. Specific versus nonspecific binding of cationic PNAs to duplex DNA.

5. Thermodynamic characterization of binding Oxytricha nova single strand telomere DNA with the alpha protein N-terminal domain.

Review 6. What drives proteins into the major or minor grooves of DNA?

7. Theoretical assessment of the oligolysine model for ionic interactions in protein-DNA complexes.

8. Escherichia coli DNA adenine methyltransferase: the structural basis of processive catalysis and indirect read-out.

Review 9. DNA curvature and flexibility in vitro and in vivo.

10. Thermodynamic and kinetic framework of selenocysteyl-tRNASec recognition by elongation factor SelB.