Literature DB >> 7306511

Nuclear magnetic resonance relaxation in nucleic acid fragments: models for internal motion.

G Lipari, A Szabo.   

Abstract

A variety of models incorporating internal motion, which can be used to extract information from nuclear magnetic resonance relaxation studies of deoxyribonucleic acid fragments, are formulated. Illustrative analyses of some recent multinuclear relaxation data are presented. Special emphasis is placed on determining whether the information extracted is unique. It is shown that the data are consistent with several physical pictures of the internal motion. However, all the models we have considered imply the existence of large-amplitude internal motions on the nanosecond time scale.

Mesh:

Substances:

Year:  1981        PMID: 7306511     DOI: 10.1021/bi00524a053

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  21 in total

1.  Flexibility of duplex DNA on the submicrosecond timescale.

Authors:  T M Okonogi; A W Reese; S C Alley; P B Hopkins; B H Robinson
Journal:  Biophys J       Date:  1999-12       Impact factor: 4.033

2.  NMR backbone dynamics of VEK-30 bound to the human plasminogen kringle 2 domain.

Authors:  Min Wang; Mary Prorok; Francis J Castellino
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

3.  Anisotropic rotation in nucleic acid fragments: significance for determination of structures from NMR data.

Authors:  A J Birchall; A N Lane
Journal:  Eur Biophys J       Date:  1990       Impact factor: 1.733

Review 4.  NMR studies of dynamic biomolecular conformational ensembles.

Authors:  Dennis A Torchia
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2014-11-28       Impact factor: 9.795

5.  Structural insights into the role of the cyclic backbone in a squash trypsin inhibitor.

Authors:  Norelle L Daly; Louise Thorstholm; Kathryn P Greenwood; Gordon J King; K Johan Rosengren; Begoña Heras; Jennifer L Martin; David J Craik
Journal:  J Biol Chem       Date:  2013-10-29       Impact factor: 5.157

6.  Protein Rotational Dynamics in Aligned Lipid Membranes Probed by Anisotropic T NMR Relaxation.

Authors:  Emmanuel O Awosanya; Alexander A Nevzorov
Journal:  Biophys J       Date:  2018-01-23       Impact factor: 4.033

7.  Influence of the coupling of interdomain and overall motions on NMR relaxation.

Authors:  Vance Wong; David A Case; Attila Szabo
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-18       Impact factor: 11.205

8.  Increased hydrophobicity and decreased backbone flexibility explain the lower solubility of a cataract-linked mutant of γD-crystallin.

Authors:  Priya R Banerjee; Shadakshara S Puttamadappa; Ajay Pande; Alexander Shekhtman; Jayanti Pande
Journal:  J Mol Biol       Date:  2011-07-30       Impact factor: 5.469

Review 9.  Characterizing micro-to-millisecond chemical exchange in nucleic acids using off-resonance R relaxation dispersion.

Authors:  Atul Rangadurai; Eric S Szymaski; Isaac J Kimsey; Honglue Shi; Hashim M Al-Hashimi
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2019-05-11       Impact factor: 9.795

10.  Functional dynamics of the folded ankyrin repeats of I kappa B alpha revealed by nuclear magnetic resonance.

Authors:  Carla F Cervantes; Phineus R L Markwick; Shih-Che Sue; J Andrew McCammon; H Jane Dyson; Elizabeth A Komives
Journal:  Biochemistry       Date:  2009-08-25       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.