Literature DB >> 7248264

Affinities of nucleic acid bases for solvent water.

P M Cullis, R Wolfenden.   

Abstract

Equilibria of transfer of pyridine and benzene derivatives, from the vapor phase to dilute aqueous solution, are enhanced by the introduction of exocyclic amino and hydroxyl substituents. Much larger increases are associated with the introduction of imino and keto substituents. Purine derivatives exhibit comparable behavior. These observations are discussed in relation to group transfer potentials, the observed affinities of nucleic acid bases for the active sites of proteins, environmental influences on the occurrence of rate tautomers that lead to errors in base pairing, and hypotheses concerning the origins of the genetic code.

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Year:  1981        PMID: 7248264     DOI: 10.1021/bi00514a006

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  Charge distribution from a simple molecular orbital type calculation and non-bonding interaction terms in the force field MAB.

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2.  Mechanism of premature translation termination on a sense codon.

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3.  Characterization of imperfect DNA duplexes containing unpaired bases and non-Watson-Crick base pairs.

Authors:  D H Evans; A R Morgan
Journal:  Nucleic Acids Res       Date:  1986-05-27       Impact factor: 16.971

Review 4.  Experimental studies related to the origin of the genetic code and the process of protein synthesis--a review.

Authors:  J C Lacey; D W Mullins
Journal:  Orig Life       Date:  1983-03

5.  Herpes simplex virus-1 DNA primase: a remarkably inaccurate yet selective polymerase.

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Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

6.  Analogue encoding of physicochemical properties of proteins in their cognate messenger RNAs.

Authors:  Anton A Polyansky; Mario Hlevnjak; Bojan Zagrovic
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

7.  Spontaneous Emergence of Self-Replicating Molecules Containing Nucleobases and Amino Acids.

Authors:  Bin Liu; Charalampos G Pappas; Jim Ottelé; Gaël Schaeffer; Christoph Jurissek; Priscilla F Pieters; Meniz Altay; Ivana Marić; Marc C A Stuart; Sijbren Otto
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8.  The size of the internal loop in DNA hairpins influences their targeting with partially complementary strands.

Authors:  Iztok Prislan; Hui-Ting Lee; Cynthia Lee; Luis A Marky
Journal:  J Phys Chem B       Date:  2014-12-19       Impact factor: 2.991

9.  Interdependence, Reflexivity, Fidelity, Impedance Matching, and the Evolution of Genetic Coding.

Authors:  Charles W Carter; Peter R Wills
Journal:  Mol Biol Evol       Date:  2018-02-01       Impact factor: 16.240

10.  Solvation Thermodynamics in Different Solvents: Water-Chloroform Partition Coefficients from Grid Inhomogeneous Solvation Theory.

Authors:  Johannes Kraml; Florian Hofer; Anna S Kamenik; Franz Waibl; Ursula Kahler; Michael Schauperl; Klaus R Liedl
Journal:  J Chem Inf Model       Date:  2020-07-20       Impact factor: 6.162

  10 in total

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