Literature DB >> 724497

The interaction of core histones with DNA: equilibrium binding studies.

D R Burton, M J Butler, J E Hyde, D Phillips, C J Skidmore, I O Walker.   

Abstract

The binding of core histone proteins to DNA, measured as a function of [NaCl[ is a reversible process. Dissociation and reassociation occurs in two stages. Between 0.7 and 1.2 M NaCl H2a H2b bind non-cooperatively as an equimolar complex with deltaGo = 1.6 Kcals/mole at 4 degree C and 1.0 M NaCl. Between 1.2 and 2.0 M NaCl H3 and H4 bind cooperatively as an equimolar complex with delta Go = 7.4 Kcal/mole at 4 degree C and 1.0 M NaCl. The proper binding of H2a and H2b requires the presence of bound H3 and H4. Nuclease digestion of the H3-H4 DNA produces a tetramer of H3-H4 bound to fragments of DNA 145, 125 and 104 base pairs long. Thus an H3-H4 tetramer can protect fragments of DNA as long as those found in complete core particles and must therefore span the nucleosome core particle.

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Year:  1978        PMID: 724497      PMCID: PMC342701          DOI: 10.1093/nar/5.10.3643

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

Review 1.  Chromosomal proteins and chromatin structure.

Authors:  S C Elgin; H Weintraub
Journal:  Annu Rev Biochem       Date:  1975       Impact factor: 23.643

2.  Covalent cross-linking of histones in chromatin.

Authors:  J E Hyde; I O Walker
Journal:  FEBS Lett       Date:  1975-02-01       Impact factor: 4.124

3.  Preparation of native chromatin and damage caused by shearing.

Authors:  M Noll; J O Thomas; R D Kornberg
Journal:  Science       Date:  1975-03-28       Impact factor: 47.728

4.  Specific folding and contraction of DNA by histones H3 and H4.

Authors:  M Bina-Stein; R T Simpson
Journal:  Cell       Date:  1977-07       Impact factor: 41.582

5.  A model for chromatin based upon two symmetrically paired half-nucleosomes.

Authors:  H Weintraub; A Worcel; B Alberts
Journal:  Cell       Date:  1976-11       Impact factor: 41.582

6.  The organization of histones and DNA in chromatin: evidence for an arginine-rich histone kernel.

Authors:  R D Camerini-Otero; B Sollner-Webb; G Felsenfeld
Journal:  Cell       Date:  1976-07       Impact factor: 41.582

7.  Chromatin structure as probed by nucleases and proteases: evidence for the central role of histones H3 and H4.

Authors:  B Sollner-Webb; R D Camerini-Otero; G Felsenfeld
Journal:  Cell       Date:  1976-09       Impact factor: 41.582

Review 8.  Chromatin.

Authors:  G Felsenfeld
Journal:  Nature       Date:  1978-01-12       Impact factor: 49.962

9.  Higher order coiling of DNA in chromatin.

Authors:  A Worcel; C Benyajati
Journal:  Cell       Date:  1977-09       Impact factor: 41.582

10.  Characterization of the octamer of histones free in solution.

Authors:  J O Thomas; P J Butler
Journal:  J Mol Biol       Date:  1977-11       Impact factor: 5.469

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  20 in total

1.  Characterization of MeCP2, a vertebrate DNA binding protein with affinity for methylated DNA.

Authors:  R R Meehan; J D Lewis; A P Bird
Journal:  Nucleic Acids Res       Date:  1992-10-11       Impact factor: 16.971

2.  Nanotribology results show that DNA forms a mechanically resistant 2D network in metaphase chromatin plates.

Authors:  Isaac Gállego; Gerard Oncins; Xavier Sisquella; Xavier Fernàndez-Busquets; Joan-Ramon Daban
Journal:  Biophys J       Date:  2010-12-15       Impact factor: 4.033

3.  Fast, long-range, reversible conformational fluctuations in nucleosomes revealed by single-pair fluorescence resonance energy transfer.

Authors:  Miroslav Tomschik; Haocheng Zheng; Ken van Holde; Jordanka Zlatanova; Sanford H Leuba
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

4.  Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

Authors:  Chunyuan Jin; Gary Felsenfeld
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

5.  Viscosity of chromatin solutions increases with increasing ionic strength.

Authors:  R Brust
Journal:  Mol Biol Rep       Date:  1986       Impact factor: 2.316

6.  The binding of histones H1 and H5 to chromatin in chicken erythrocyte nuclei.

Authors:  N M Kumar; I O Walker
Journal:  Nucleic Acids Res       Date:  1980-08-25       Impact factor: 16.971

7.  On the de novo formation of compact oligonucleosomes at high ionic strength. Evidence for nucleosomal sliding in high salt.

Authors:  W O Weischet
Journal:  Nucleic Acids Res       Date:  1979-09-25       Impact factor: 16.971

8.  Nucleosome dissociation and transfer in concentrated salt solutions.

Authors:  P C Stacks; V N Schumaker
Journal:  Nucleic Acids Res       Date:  1979-12-20       Impact factor: 16.971

9.  Histone-DNA interactions in the chromatin of procyclic Trypanosoma brucei brucei.

Authors:  K Bender; B Betschart; H Hecker
Journal:  Parasitol Res       Date:  1992       Impact factor: 2.289

10.  The middle region of an HP1-binding protein, HP1-BP74, associates with linker DNA at the entry/exit site of nucleosomal DNA.

Authors:  Kayoko Hayashihara; Susumu Uchiyama; Shigeru Shimamoto; Shouhei Kobayashi; Miroslav Tomschik; Hidekazu Wakamatsu; Daisuke No; Hiroki Sugahara; Naoto Hori; Masanori Noda; Tadayasu Ohkubo; Jordanka Zlatanova; Sachihiro Matsunaga; Kiichi Fukui
Journal:  J Biol Chem       Date:  2009-12-30       Impact factor: 5.157

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