Literature DB >> 7225372

Left-handed deoxyribonucleic acid double helix in solution.

C K Mitra, M H Sarma, R H Sarma.   

Abstract

Magnetic shielding constants were calculated for the synthetic deoxyribonucleic acid (DNA) double helix poly(dG-dC).poly(dG-dC) from the x, y, and z coordinates of Z-DNA of Rich and co-workers [Wang, A. H-J., Quigley, G. J., Kolpak, F. J., Crawford, J. L., van Boom, J. H., van der Marel, G., & Rich, A. (1979) Nature (London) 282, 680-686)] and B-DNA of Arnott & Hukins [Arnott, S., & Hukins, D. W. L. (1972) Biochem. Biophys. Res. Commun. 47, 1504-1509], taking into account the contribution to shielding from ring current effects and effects from the diamagnetic and paramagnetic components of the atomic magnetic anisotropy. Comparison of the calculated shielding values with the experimentally observed nuclear magnetic resonance shift data for poly(dG-dC).poly(dG-dC) in high salt solution shows striking agreement for Z-DNA and considerable deviation for B-DNA, indicating that this synthetic DNA double helix is high salt solution can assume the spatial configuration of the left-handed Z-DNA double helix known to occur in crystals.

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Year:  1981        PMID: 7225372     DOI: 10.1021/bi00510a046

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Stabilization of Z-DNA by polyarginine near physiological ionic strength.

Authors:  L Klevan; V N Schumaker
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

2.  Statistical mechanics of the B----Z transition of DNA: contribution of diffuse ionic interactions.

Authors:  D M Soumpasis
Journal:  Proc Natl Acad Sci U S A       Date:  1984-08       Impact factor: 11.205

3.  Right-handed and left-handed DNA: studies of B- and Z-DNA by using proton nuclear Overhauser effect and P NMR.

Authors:  D J Patel; S A Kozlowski; A Nordheim; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1982-03       Impact factor: 11.205

4.  Daunomycin inhibits the B leads to Z transition in poly d(G-C).

Authors:  J B Chaires
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

5.  Stabilization of (dG-dC)n.(dG-dC)n in the Z conformation by a crosslinking reaction.

Authors:  H Castleman; L H Hanau; B F Erlanger
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

6.  The B goes to Z transition of poly(dG-dC) . poly(dG-dC) modified by some platinum derivatives.

Authors:  B Malfoy; B Hartmann; M Leng
Journal:  Nucleic Acids Res       Date:  1981-11-11       Impact factor: 16.971

7.  A 1H nOe and CD study of the salt-concentration dependence of the structure of d(G-C).

Authors:  D G Reid; S A Salisbury; D H Williams
Journal:  Nucleic Acids Res       Date:  1983-06-11       Impact factor: 16.971

8.  Proton NMR study of the B----Z transition of d(CGm5CG)2 and d(CGm5CGCG)2: theory and experiment.

Authors:  C Giessner-Prettre; B Pullman; S Tran-Dinh; J M Neumann; T Huynh-Dinh; J Igolen
Journal:  Nucleic Acids Res       Date:  1984-04-11       Impact factor: 16.971

9.  The B reversible Z transition of poly(dI-br5dC).poly(dI-br5dC). A quantitative description of the Z form dynamic structure.

Authors:  B Hartmann; J Pilet; M Ptak; J Ramstein; B Malfoy; M Leng
Journal:  Nucleic Acids Res       Date:  1982-05-25       Impact factor: 16.971

10.  Conformational transitions of poly(dA-dT)poly(dA-dT) in ethanolic solutions.

Authors:  M Vorlícková; P Sedlácek; J Kypr; J Sponar
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

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