Literature DB >> 7162990

On the cooperative and noncooperative binding of ethidium to DNA.

S A Winkle, L S Rosenberg, T R Krugh.   

Abstract

The equilibrium binding of ethidium bromide to native DNAs and to poly(dG-dC) X poly(dG-dC) has been studied by both phase partition and direct spectrophotometric techniques. The binding isotherms obtained from both experimental techniques show that ethidium binds in a cooperative manner to E. coli DNA. On the other hand, no evidence of cooperative binding was observed in the binding isotherms obtained with calf thymus, C. perfringens, M. lysodeikticus, or poly(dG-dC) X (dG-dC) under the experimental conditions used (0.1 M NaCl).

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Year:  1982        PMID: 7162990      PMCID: PMC327080          DOI: 10.1093/nar/10.24.8211

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  27 in total

1.  Interaction of closed circular DNA with intercalative dyes. II. The free energy of superhelix formation in SV40 DNA.

Authors:  W Bauer; J Vinograd
Journal:  J Mol Biol       Date:  1970-02-14       Impact factor: 5.469

2.  Comparative binding study of the interaction of quinacrine and ethidium bromide with DNA and nucleohistone.

Authors:  J Bontemps; E Fredericq
Journal:  Biophys Chem       Date:  1974-06       Impact factor: 2.352

3.  Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice.

Authors:  J D McGhee; P H von Hippel
Journal:  J Mol Biol       Date:  1974-06-25       Impact factor: 5.469

4.  Interaction of ethidium bromide with DNA. Optical and electrooptical study.

Authors:  C Houssier; B Hardy; E Fredericq
Journal:  Biopolymers       Date:  1974-06       Impact factor: 2.505

5.  A new method for the determination of the binding capacity of testosterone-estradiol-binding-globulin in human plasma.

Authors:  V P Shanbhag; R Södergård; H Carstensen; P A Albertsson
Journal:  J Steroid Biochem       Date:  1973-09       Impact factor: 4.292

6.  Fluorescence decay time characteristics of the complex between ethidium bromide and nucleic acids.

Authors:  V W Burns
Journal:  Arch Biochem Biophys       Date:  1969-09       Impact factor: 4.013

7.  Calculation of binding isotherms for heterogenous polymers.

Authors:  D M Crothers
Journal:  Biopolymers       Date:  1968-04       Impact factor: 2.505

8.  Complex formation between ethidium bromide and nucleic acids.

Authors:  M J Waring
Journal:  J Mol Biol       Date:  1965-08       Impact factor: 5.469

9.  Ethidium bromide as a cooperative effector of a DNA structure.

Authors:  F M Pohl; T M Jovin; W Baehr; J J Holbrook
Journal:  Proc Natl Acad Sci U S A       Date:  1972-12       Impact factor: 11.205

10.  Studies on interaction of anthracycline antibiotics and deoxyribonucleic acid: equilibrium binding studies on interaction of daunomycin with deoxyribonucleic acid.

Authors:  J B Chaires; N Dattagupta; D M Crothers
Journal:  Biochemistry       Date:  1982-08-17       Impact factor: 3.162

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  5 in total

1.  Footprinting at low temperatures: evidence that ethidium and other simple intercalators can discriminate between different nucleotide sequences.

Authors:  K R Fox; M J Waring
Journal:  Nucleic Acids Res       Date:  1987-01-26       Impact factor: 16.971

2.  Double-beam autocompensation for fluorescence polarization measurements in flow cytometry.

Authors:  W Beisker; W G Eisert
Journal:  Biophys J       Date:  1985-05       Impact factor: 4.033

3.  High-sensitivity two-color detection of double-stranded DNA with a confocal fluorescence gel scanner using ethidium homodimer and thiazole orange.

Authors:  H S Rye; M A Quesada; K Peck; R A Mathies; A N Glazer
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

4.  RNA structure analysis using methidiumpropyl-EDTA.Fe(II): a base-pair-specific RNA structure probe.

Authors:  C P Vary; J N Vournakis
Journal:  Proc Natl Acad Sci U S A       Date:  1984-11       Impact factor: 11.205

5.  Elimination of Chromosomal Island SpyCIM1 from Streptococcus pyogenes Strain SF370 Reverses the Mutator Phenotype and Alters Global Transcription.

Authors:  Christina Hendrickson; Chad W Euler; Scott V Nguyen; Maliha Rahman; Kimberly A McCullor; Catherine J King; Vincent A Fischetti; W Michael McShan
Journal:  PLoS One       Date:  2015-12-23       Impact factor: 3.240

  5 in total

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