Literature DB >> 7154081

A geometric approach to macromolecule-ligand interactions.

I D Kuntz, J M Blaney, S J Oatley, R Langridge, T E Ferrin.   

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Year:  1982        PMID: 7154081     DOI: 10.1016/0022-2836(82)90153-x

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


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  384 in total

1.  The sensitivity of the results of molecular docking to induced fit effects: application to thrombin, thermolysin and neuraminidase.

Authors:  C W Murray; C A Baxter; A D Frenkel
Journal:  J Comput Aided Mol Des       Date:  1999-11       Impact factor: 3.686

2.  MCDOCK: a Monte Carlo simulation approach to the molecular docking problem.

Authors:  M Liu; S Wang
Journal:  J Comput Aided Mol Des       Date:  1999-09       Impact factor: 3.686

3.  DREAM++: flexible docking program for virtual combinatorial libraries.

Authors:  S Makino; T J Ewing; I D Kuntz
Journal:  J Comput Aided Mol Des       Date:  1999-09       Impact factor: 3.686

4.  Statistical relationships among docking scores for different protein binding sites.

Authors:  R T Koehler; H O Villar
Journal:  J Comput Aided Mol Des       Date:  2000-01       Impact factor: 3.686

5.  Morphological similarity: a 3D molecular similarity method correlated with protein-ligand recognition.

Authors:  A N Jain
Journal:  J Comput Aided Mol Des       Date:  2000-02       Impact factor: 3.686

6.  Automated docking and molecular dynamics simulations of nimesulide in the cyclooxygenase active site of human prostaglandin-endoperoxide synthase-2 (COX-2).

Authors:  R García-Nieto; C Pérez; F Gago
Journal:  J Comput Aided Mol Des       Date:  2000-02       Impact factor: 3.686

7.  Fast prediction and visualization of protein binding pockets with PASS.

Authors:  G P Brady; P F Stouten
Journal:  J Comput Aided Mol Des       Date:  2000-05       Impact factor: 3.686

8.  Comparison of two implementations of the incremental construction algorithm in flexible docking of thrombin inhibitors.

Authors:  R M Knegtel; D M Bayada; R A Engh; W von der Saal; V J van Geerestein; P D Grootenhuis
Journal:  J Comput Aided Mol Des       Date:  1999-03       Impact factor: 3.686

9.  A comparative docking study and the design of potentially selective MMP inhibitors.

Authors:  S Hanessian; N Moitessier; E Therrien
Journal:  J Comput Aided Mol Des       Date:  2001-10       Impact factor: 3.686

10.  One site fits both: a model for the ternary complex of folate + NADPH in R67 dihydrofolate reductase, a D2 symmetric enzyme.

Authors:  E E Howell; U Shukla; S N Hicks; R D Smiley; L A Kuhn; M I Zavodszky
Journal:  J Comput Aided Mol Des       Date:  2001-11       Impact factor: 3.686

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