Literature DB >> 7111021

Simultaneous stability of short alternating Z and B helices in synthetic DNA concatamers.

F Quadrifoglio, G Manzini, K Dinkelspiel, R Crea.   

Abstract

The conformation of d(TA)3 (CG)3 has been studied in aqueous solution in the presence of high salt concentration. The oligonucleotide forms in solution concatamers. In the presence of 5 M NaC1 the concatamer is built up of d(CG)3 blocks in Z-conformation and of d(TA)3 blocks in B-conformation. In the presence of 4 M LiCl both blocks in the concatamer display a B-type structure.

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Year:  1982        PMID： 7111021      PMCID： PMC320750          DOI： 10.1093/nar/10.12.3759

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  16 in total

1.  Different conformations of double-stranded nucleic acid in solution as revealed by circular dichroism.

Authors:  V I Ivanov; L E Minchenkova; A K Schyolkina; A I Poletayev
Journal:  Biopolymers       Date:  1973       Impact factor: 2.505

2.  Molecular structure of a left-handed double helical DNA fragment at atomic resolution.

Authors:  A H Wang; G J Quigley; F J Kolpak; J L Crawford; J H van Boom; G van der Marel; A Rich
Journal:  Nature       Date:  1979-12-13       Impact factor: 49.962

3.  Does DNA adopt the C form in concentrated salt solutions or in organic solvent water mixtures? An x-ray diffraction study of DNA fibers immersed in various media.

Authors:  S B Zimmerman; B H Pheiffer
Journal:  J Mol Biol       Date:  1980-09-25       Impact factor: 5.469

4.  The tetramer d(CpGpCpG) crystallizes as a left-handed double helix.

Authors:  J L Crawford; F J Kolpak; A H Wang; G J Quigley; J H van Boom; G van der Marel; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

5.  Crystal structure analysis of a complete turn of B-DNA.

Authors:  R Wing; H Drew; T Takano; C Broka; S Tanaka; K Itakura; R E Dickerson
Journal:  Nature       Date:  1980-10-23       Impact factor: 49.962

6.  High-salt d(CpGpCpG), a left-handed Z' DNA double helix.

Authors:  H Drew; T Takano; S Tanaka; K Itakura; R E Dickerson
Journal:  Nature       Date:  1980-08-07       Impact factor: 49.962

7.  Chemical synthesis of genes for human insulin.

Authors:  R Crea; A Kraszewski; T Hirose; K Itakura
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

8.  Conformational transitions of poly(dA-dC).poly(dG-dT) induced by high salt or in ethanolic solution.

Authors:  C Zimmer; S Tymen; C Marck; W Guschlbauer
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

9.  Left-handed double helical DNA: variations in the backbone conformation.

Authors:  A J Wang; G J Quigley; F J Kolpak; G van der Marel; J H van Boom; A Rich
Journal:  Science       Date:  1981-01-09       Impact factor: 47.728

10.  Left-handed DNA in restriction fragments and a recombinant plasmid.

Authors:  J Kłysik; S M Stirdivant; J E Larson; P A Hart; R D Wells
Journal:  Nature       Date:  1981-04-23       Impact factor: 49.962
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  5 in total

1.  DNA duplex with the potential to change handedness after every half a turn.

Authors:  S K Brahmachari; R K Mishra; R Bagga; N Ramesh
Journal:  Nucleic Acids Res       Date:  1989-09-25       Impact factor: 16.971

2.  Thermodynamic behaviour of the heptadecadeoxynucleotide d(CGCGCGTTTTTCGCGCG) forming B and Z hairpins in aqueous solution.

Authors:  L E Xodo; G Manzini; F Quadrifoglio; G A van der Marel; J H van Boom
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

3.  NMR, CD and IR spectroscopies of a tridecanucleotide containing a no-base residue: coexistence of B and Z conformations.

Authors:  S Pochet; T Huynh-Dinh; J M Neumann; S Tran-Dinh; S Adam; J Taboury; E Taillandier; J Igolen
Journal:  Nucleic Acids Res       Date:  1986-01-24       Impact factor: 16.971

4.  Interruptions of (CG)n sequences by GG, TG and CA need not prevent B to Z transition in solution.

Authors:  R K Mishra; P K Latha; S K Brahmachari
Journal:  Nucleic Acids Res       Date:  1988-05-25       Impact factor: 16.971

5.  Pairing nanoarchitectonics of oligodeoxyribonucleotides with complex diversity: concatemers and self-limited complexes.

Authors:  Anastasia A Zamoskovtseva; Victor M Golyshev; Valeria A Kizilova; Georgiy Yu Shevelev; Dmitrii V Pyshnyi; Alexander A Lomzov
Journal:  RSC Adv       Date:  2022-02-23       Impact factor: 3.361
  5 in total

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