Literature DB >> 7038675

Catalytic mechanism of serine proteases: reexamination of the pH dependence of the histidyl 1J13C2-H coupling constant in the catalytic triad of alpha-lytic protease.

W W Bachovchin, R Kaiser, J H Richards, J D Roberts.   

Abstract

L-Histidine, 90% 13C enriched at the C2 position, was incorporated into the catalytic triad of alpha-lytic protease (EC 3.4.21.12) with the aid of histidine-requiring mutant of Lysobacter enzymogenes (ATC 29487), and the pH dependence of the coupling constant between this carbon atom and its directly bonded proton was reinvestigated. The high degree of specific 13C isotopic enrichment attainable with the auxotroph permits direct observation and measurement of this coupling constant in proton-coupled 13C NMR spectra at 67.89 MHz and at 15.1 MHz. In contrast to the earlier study, the present study indicate that this coupling constant does respond to a microscopic ionization with pKa near 7.0; moreover, the magnitude of the values of 1JC-H observed are in accord with those expected for titration of the histidyl residue. We conclude that the original measurement must be in error and that this coupling constant now also supports a histidyl residue that titrates more or less normally as a component of the catalytic triad of serine proteases.

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Year:  1981        PMID: 7038675      PMCID: PMC349258          DOI: 10.1073/pnas.78.12.7323

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  26 in total

1.  The charge-relay system of serine proteinases: proton magnetic resonance titration studies of the four histidines of porcine trypsin.

Authors:  J L Markley; M A Porubcan
Journal:  J Mol Biol       Date:  1976-04-15       Impact factor: 5.469

Review 2.  Carbon-13 nuclear magnetic resonance studies of proteins.

Authors:  W Egan; H Shindo; J S Cohen
Journal:  Annu Rev Biophys Bioeng       Date:  1977

3.  Molecular orbital studies of enzyme activity: I: Charge relay system and tetrahedral intermediate in acylation of serine proteinases.

Authors:  S Scheiner; D A Kleier; W N Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  1975-07       Impact factor: 11.205

4.  Synthesis and evaluation of a model for the so-called "charge-relay" system of the serine esterases.

Authors:  G A Rogers; T C Bruice
Journal:  J Am Chem Soc       Date:  1974-04-17       Impact factor: 15.419

5.  High resolution nuclear magnetic resonance studies of the active site of chymotrypsin. I. The hydrogen bonded protons of the "charge relay" system.

Authors:  G Robillard; R G Shulman
Journal:  J Mol Biol       Date:  1974-07-05       Impact factor: 5.469

6.  High resolution nuclear magnetic resonance studies of the active site of chymotrypsin. II. Polarization of histidine 57 by substrate analogues and competitive inhibitors.

Authors:  G Robillard; R G Shulman
Journal:  J Mol Biol       Date:  1974-07-05       Impact factor: 5.469

Review 7.  Some pertinent aspects of mechanism as determined with small molecules.

Authors:  T C Bruice
Journal:  Annu Rev Biochem       Date:  1976       Impact factor: 23.643

8.  Zymogen activation in serine proteinases. Proton magnetic resonance pH titration studies of the two histidines of bovine chymotrypsinogen A and chymotrypsin Aalpha.

Authors:  J L Markley; I B Ibañez
Journal:  Biochemistry       Date:  1978-10-31       Impact factor: 3.162

9.  Mechanism of hydrolysis by serine proteases: direct determination of the pKa's of aspartyl-102 and aspartyl-194 in bovine trypsin using difference infrared spectroscopy.

Authors:  R E Koeppe; R M Stroud
Journal:  Biochemistry       Date:  1976-08-10       Impact factor: 3.162

10.  Molecular orbital studies of enzyme activity: catalytic mechanism of serine proteinases.

Authors:  S Scheiner; W N Lipscomb
Journal:  Proc Natl Acad Sci U S A       Date:  1976-02       Impact factor: 11.205

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  10 in total

1.  Structure and catalysis of acylaminoacyl peptidase: closed and open subunits of a dimer oligopeptidase.

Authors:  Veronika Harmat; Klarissza Domokos; Dóra K Menyhárd; Anna Palló; Zoltán Szeltner; Ilona Szamosi; Tamás Beke-Somfai; Gábor Náray-Szabó; László Polgár
Journal:  J Biol Chem       Date:  2010-11-16       Impact factor: 5.157

2.  Structure and function of a serine carboxypeptidase adapted for degradation of the protein synthesis antibiotic microcin C7.

Authors:  Vinayak Agarwal; Anton Tikhonov; Anastasia Metlitskaya; Konstantin Severinov; Satish K Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2012-03-02       Impact factor: 11.205

3.  Consequences of breaking the Asp-His hydrogen bond of the catalytic triad: effects on the structure and dynamics of the serine esterase cutinase.

Authors:  E Y Lau; T C Bruice
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

4.  pH-dependent random coil (1)H, (13)C, and (15)N chemical shifts of the ionizable amino acids: a guide for protein pK a measurements.

Authors:  Gerald Platzer; Mark Okon; Lawrence P McIntosh
Journal:  J Biomol NMR       Date:  2014-09-20       Impact factor: 2.835

5.  Tautomerism, acid-base equilibria, and H-bonding of the six histidines in subtilisin BPN' by NMR.

Authors:  Regina M Day; Craig J Thalhauser; James L Sudmeier; Matthew P Vincent; Ekaterina V Torchilin; David G Sanford; Christopher W Bachovchin; William W Bachovchin
Journal:  Protein Sci       Date:  2003-04       Impact factor: 6.725

6.  Cryoenzymology of trypsin. 13C-n.m.r. detection of an acyl-trypsin intermediate in the trypsin-catalysed hydrolysis of a highly specific substrate at subzero temperature.

Authors:  N E Mackenzie; J P Malthouse; A I Scott
Journal:  Biochem J       Date:  1984-04-15       Impact factor: 3.857

7.  Catalysis by acetylcholinesterase in two-hydronic-reactive states. Integrity of deuterium oxide effects and hydron inventories.

Authors:  E Salih
Journal:  Biochem J       Date:  1992-07-15       Impact factor: 3.857

8.  Computer modeling of substrate binding to lipases from Rhizomucor miehei, Humicola lanuginosa, and Candida rugosa.

Authors:  M Norin; F Haeffner; A Achour; T Norin; K Hult
Journal:  Protein Sci       Date:  1994-09       Impact factor: 6.725

9.  Measurement of histidine pKa values and tautomer populations in invisible protein states.

Authors:  Alexandar L Hansen; Lewis E Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

10.  Analysis of prepro-alpha-lytic protease expression in Escherichia coli reveals that the pro region is required for activity.

Authors:  J L Silen; D Frank; A Fujishige; R Bone; D A Agard
Journal:  J Bacteriol       Date:  1989-03       Impact factor: 3.490

  10 in total

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