Literature DB >> 7031660

Changes in the hydrogen exchange kinetics of Escherichia coli aspartate transcarbamylase produced by effector binding and subunit association.

M Lennick, N M Allewell.   

Abstract

Large changes in solvent accessibility to aspartate transcarbamylase (aspartate carbamoyltransferase, carbamoylphosphate:L-aspartate carbamoyltransferase, EC 2.1.3.2), as monitored by tritium exchange, result from binding of substrates and substrate analogs to the catalytic subunit (c3), binding of nucleoside triphosphates to the regulatory subunit (r2), and subunit association. Rates of exchange are reduced in each of these cases, although to different degrees. Succinate, in the presence of carbamoyl phosphate, retards exchange from c3 no more than carbamoyl phosphate alone, and less than N-phosphonacetyl-L-aspartate, a bisubstrate analog. Larger changes in rates of exchange from r2 are produced by CTP than by ATP; however, both CTP and ATP accelerate exchange from c3 to the same extent. The changes in the kinetics of exchange that result from binding of both substrate analogs and nucleoside triphosphates to the native enzyme (c6r6) are much smaller. Carbamoyl phosphate, with or without succinate, retards exchange only slightly, while the bisubstrate analog has a somewhat larger effect. Experiments with reconstituted enzyme, in which only c3 is tritium labeled, indicate that changes in solvent accessibility produced by active site ligands are largely confined to c3. Neither CTP nor ATP alters the overall rate of exchange from c6r6 significantly. The possibility of opposing changes in the two types of subunits was ruled out in experiments in which only one subunit was labeled. The nonadditive effects of ligation and subunit association imply a set of responsive protons common to both processes and suggest that they are linked not only thermodynamically and functionally but also dynamically.

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Year:  1981        PMID: 7031660      PMCID: PMC349129          DOI: 10.1073/pnas.78.11.6759

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Energetics of ligand binding to proteins.

Authors:  G Weber
Journal:  Adv Protein Chem       Date:  1975

2.  ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL.

Authors:  J MONOD; J WYMAN; J P CHANGEUX
Journal:  J Mol Biol       Date:  1965-05       Impact factor: 5.469

3.  Measurement of structural and free energy changes in hemoglobin by hydrogen exchange methods.

Authors:  S W Englander
Journal:  Ann N Y Acad Sci       Date:  1975-04-15       Impact factor: 5.691

4.  An equilibrium binding study of the interaction of aspartate transcarbamylase with cytidine 5'-triphosphate and adenosine 5'-triphosphate.

Authors:  S Matsumoto; G G Hammes
Journal:  Biochemistry       Date:  1973-03-27       Impact factor: 3.162

5.  A hydrogen--deuterium exchange study of the conformation of bovine liver glutamate dehydrogenase.

Authors:  M H Stryker; F S Parker
Journal:  Arch Biochem Biophys       Date:  1970-11       Impact factor: 4.013

6.  The linkage between oxygenation and subunit dissociation in human hemoglobin.

Authors:  G K Ackers; H R Halvorson
Journal:  Proc Natl Acad Sci U S A       Date:  1974-11       Impact factor: 11.205

7.  Substrate- and inhibitor-induced conformational changes in enzymes measured by tritium-hydrogen exchange. II. Yeast pyruvate decarboxylase.

Authors:  M P Printz; A D Gounaris
Journal:  J Biol Chem       Date:  1972-11-25       Impact factor: 5.157

8.  Hydrogen-tritium exchange.

Authors:  S W Englander; J J Englander
Journal:  Methods Enzymol       Date:  1972       Impact factor: 1.600

9.  The purification of aspartate transcarbamylase of Escherichia coli and separation of its protein subunits.

Authors:  J C Gerhart; H Holoubek
Journal:  J Biol Chem       Date:  1967-06-25       Impact factor: 5.157

10.  Conformational changes in aspartate transcarbamylase. 3. A functional model for allosteric behavior.

Authors:  G Markus; D K McClintock; J B Bussel
Journal:  J Biol Chem       Date:  1971-02-10       Impact factor: 5.157

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  6 in total

1.  Substrate-induced conformational change in a trimeric ornithine transcarbamoylase.

Authors:  Y Ha; M T McCann; M Tuchman; N M Allewell
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-02       Impact factor: 11.205

2.  Mapping structural perturbations in Escherichia coli aspartate transcarbamylase by medium resolution hydrogen exchange.

Authors:  D S Burz; N M Allewell
Journal:  Biophys J       Date:  1986-01       Impact factor: 4.033

3.  Temperature effects on the allosteric responses of native and chimeric aspartate transcarbamoylases.

Authors:  L Liu; M E Wales; J R Wild
Journal:  J Mol Biol       Date:  1998-10-02       Impact factor: 5.469

4.  Ligation alters the pathway of urea-induced denaturation of the catalytic trimer of Escherichia coli aspartate transcarbamylase.

Authors:  S Bromberg; V J LiCata; D Mallikarachchi; N M Allewell
Journal:  Protein Sci       Date:  1994-08       Impact factor: 6.725

5.  Thermodynamics of assembly of Escherichia coli aspartate transcarbamoylase.

Authors:  M P McCarthy; N M Allewell
Journal:  Proc Natl Acad Sci U S A       Date:  1983-11       Impact factor: 11.205

Review 6.  Hydrogen exchange and the dynamic structure of proteins.

Authors:  C Woodward; I Simon; E Tüchsen
Journal:  Mol Cell Biochem       Date:  1982-10-29       Impact factor: 3.396

  6 in total

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