Literature DB >> 7024919

Usage of the three termination codons in a single eukaryotic cell, the Xenopus laevis oocyte.

M Bienz, E Kubli, J Kohli, S deHenau, G Huez, G Marbaix, H Grosjean.   

Abstract

Oocytes from Xenopus laevis were injected with purified amber (UAG), ochre (UAA), and opal (UGA) suppressor tRNAs from yeasts. The radioactively labeled proteins translated from the endogenous mRNAs were then separated on two-dimensional gels. All three termination codons are used in a single cell, the Xenopus laevis oocyte. But a surprisingly low number of readthrough polypeptides were observed from the 600 mRNAs studied in comparison to uninjected oocytes. The experimental data are compared with the conclusions obtained from the compilation of all available termination sequences on eukaryotic and prokaryotic mRNAs. This comparison indicates that the apparent resistance of natural termination codons against readthrough, as observed by the microinjection experiments, cannot be explained by tandem or very close second stop codons. Instead it suggests that specific context sequences around the termination codons may play a role in the efficiency of translation termination.

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Year:  1981        PMID: 7024919      PMCID: PMC327395          DOI: 10.1093/nar/9.15.3835

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  34 in total

Review 1.  Suppressors in yeast.

Authors:  D C Hawthorne; U Leupold
Journal:  Curr Top Microbiol Immunol       Date:  1974       Impact factor: 4.291

2.  In vivo translation of amber and ochre codons in Escherichia coli.

Authors:  S Kaplan
Journal:  Mol Gen Genet       Date:  1973-02-02

3.  The nature of the polypeptide chain termination signal.

Authors:  P Lu; A Rich
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

4.  Reiterated transfer RNA genes of Xenopus laevis.

Authors:  S G Clarkson; M L Birnstiel; V Serra
Journal:  J Mol Biol       Date:  1973-09-15       Impact factor: 5.469

5.  A single UGA codon functions as a natural termination signal in the coliphage q beta coat protein cistron.

Authors:  A M Weiner; K Weber
Journal:  J Mol Biol       Date:  1973-11-15       Impact factor: 5.469

6.  Genetic code: the 'nonsense' triplets for chain termination and their suppression.

Authors:  S Brenner; A O Stretton; S Kaplan
Journal:  Nature       Date:  1965-06-05       Impact factor: 49.962

7.  Adjacent effect on suppression efficiency. II. Study on ochre and amber mutants of T4 phage lysozyme.

Authors:  H Yahata; Y Ocada; A Tsugita
Journal:  Mol Gen Genet       Date:  1970

8.  Changes in somatic cell nuclei inserted into growing and maturing amphibian oocytes.

Authors:  J B Gurdon
Journal:  J Embryol Exp Morphol       Date:  1968-11

9.  The influence of the reading context upon the suppression of nonsense codons. 3.

Authors:  W Salser; M Fluck; R Epstein
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1969

10.  Low activity of -galactosidase in frameshift mutants of Escherichia coli.

Authors:  J F Atkins; D Elseviers; L Gorini
Journal:  Proc Natl Acad Sci U S A       Date:  1972-05       Impact factor: 11.205

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  13 in total

Review 1.  Eucaryotic codes.

Authors:  F Caron
Journal:  Experientia       Date:  1990-12-01

2.  Mitochondrial and nuclear mitoribosomal suppressors that enable misreading of ochre codons in yeast mitochondria : II. Specificity and extent of suppressor action.

Authors:  A Kruszewska; P P Slonimski
Journal:  Curr Genet       Date:  1984-12       Impact factor: 3.886

3.  Structural determinants for ligand capture by a class II preQ1 riboswitch.

Authors:  Mijeong Kang; Catherine D Eichhorn; Juli Feigon
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-27       Impact factor: 11.205

Review 4.  Errors and alternatives in reading the universal genetic code.

Authors:  J Parker
Journal:  Microbiol Rev       Date:  1989-09

5.  Mutations to nonsense codons in human genetic disease: implications for gene therapy by nonsense suppressor tRNAs.

Authors:  J Atkinson; R Martin
Journal:  Nucleic Acids Res       Date:  1994-04-25       Impact factor: 16.971

6.  Characterization and nucleotide sequence of a chicken gene encoding an opal suppressor tRNA and its flanking DNA segments.

Authors:  D L Hatfield; B S Dudock; F C Eden
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

7.  In vitro suppression of a nonsense mutant of Drosophila melanogaster.

Authors:  E Kubli; T Schmidt; P F Martin; W Sofer
Journal:  Nucleic Acids Res       Date:  1982-11-25       Impact factor: 16.971

8.  Usage of the three termination codons: compilation and analysis of the known eukaryotic and prokaryotic translation termination sequences.

Authors:  J Kohli; H Grosjean
Journal:  Mol Gen Genet       Date:  1981

9.  On the relationship between preferred termination codon contexts and nonsense suppression in human cells.

Authors:  R Martin
Journal:  Nucleic Acids Res       Date:  1994-01-11       Impact factor: 16.971

10.  Conserved sequences in both coding and 5' flanking regions of mammalian opal suppressor tRNA genes.

Authors:  K Pratt; F C Eden; K H You; V A O'Neill; D Hatfield
Journal:  Nucleic Acids Res       Date:  1985-07-11       Impact factor: 16.971

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