Literature DB >> 6942409

Dynamic protein structures: infrared evidence for four discrete rapidly interconverting conformers at the carbon monoxide binding site of bovine heart myoglobin.

W S Caughey, H Shimada, M G Choc, M P Tucker.   

Abstract

Infrared spectra for the carbon monoxide complex with myoglobin isolated as the oxygenyl species from bovine heart muscle were carefully examined in the C--O stretch region as either the pH or the temperature was varied. Deconvolutions of these spectra into bands of Gaussian shape suggest the presence of four bands near 1938(I), 1944(II), 1954(III), and 1965(IV) cm-1 with halfband widths of about 18, 9, 9, and 10 cm-1, respectively. The relative intensities of the four bands varied with changes in pH or temperature. 13C NMR spectra and other evidence indicate that the four C--O stretch bands arise from four discrete rapidly interconverting conformers: CI, CII, CIII, and CIV. Under conditions of physiological pH and temperature, the relative stabilities are CI approximately CII much greater than CIII approximately CIV. The delta H and delta S values for conformer interconversions are estimated to range from -8 to 34 kJ/mol and -27 to 87 J.mol-1 K-1, respectively; therefore the structures of the conformers may be expected to vary significantly. These findings provide evidence for a highly flexible, dynamic structure at the ligand-binding site of bovine myoglobin, even when ligands are bound.

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Year:  1981        PMID: 6942409      PMCID: PMC319467          DOI: 10.1073/pnas.78.5.2903

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  18 in total

1.  Neutron diffraction analysis of myoglobin: structure of the carbon monoxide derivative.

Authors:  J C Norvell; A C Nunes; B P Schoenborn
Journal:  Science       Date:  1975-11-07       Impact factor: 47.728

2.  An infrared study of CO binding to heart cytochrome c oxidase and hemoglobin A. Implications re O2 reactions.

Authors:  S Yoshikawa; M G Choc; M C O'Toole; W S Caughey
Journal:  J Biol Chem       Date:  1977-08-10       Impact factor: 5.157

3.  Structure of horse carbonmonoxyhaemoglobin.

Authors:  E J Heidner; R C Ladner; M F Perutz
Journal:  J Mol Biol       Date:  1976-07-05       Impact factor: 5.469

4.  Detection and characterization of nitrous oxide sites in the brain of a dog under halothane-N2O anesthesia.

Authors:  J M Caughey; W V Lumb; W S Caughey
Journal:  Biochem Biophys Res Commun       Date:  1977-10-10       Impact factor: 3.575

5.  Autoxidation of native oxymyoglobin from bovine heart muscle.

Authors:  T Goto; K Shikama
Journal:  Arch Biochem Biophys       Date:  1974-08       Impact factor: 4.013

6.  Differences in the infrared stretching frequency of carbon monoxide bound to abnormal hemoglobins.

Authors:  W S Coughey; J O Alben; S McCoy; S H Boyer; S Charache; P Hathaway
Journal:  Biochemistry       Date:  1969-01       Impact factor: 3.162

7.  Structure of myoglobin refined at 2-0 A resolution. II. Structure of deoxymyoglobin from sperm whale.

Authors:  T Takano
Journal:  J Mol Biol       Date:  1977-03-05       Impact factor: 5.469

8.  An x-ray study of azide methaemoglobin.

Authors:  M F Perutz; F S Mathews
Journal:  J Mol Biol       Date:  1966-10-28       Impact factor: 5.469

9.  Magnetic resonance studies of the binding of 13C-labeled carbon monoxide to myoglobins and hemoglobins containing modified hemes.

Authors:  R B Moon; K Dill; J H Richards
Journal:  Biochemistry       Date:  1977-01-25       Impact factor: 3.162

10.  Structure of hemoglobins Zürich [His E7(63)beta replaced by Arg] and Sydney [Val E11(67)beta replaced by Ala] and role of the distal residues in ligand binding.

Authors:  P W Tucker; S E Phillips; M F Perutz; R Houtchens; W S Caughey
Journal:  Proc Natl Acad Sci U S A       Date:  1978-03       Impact factor: 11.205

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  22 in total

1.  Myoglobin-CO conformational substate dynamics: 2D vibrational echoes and MD simulations.

Authors:  Kusai A Merchant; David E Thompson; Qing-Hua Xu; Ryan B Williams; Roger F Loring; Michael D Fayer
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

2.  Myoglobin-CO substate structures and dynamics: multidimensional vibrational echoes and molecular dynamics simulations.

Authors:  Kusai A Merchant; W G Noid; Ryo Akiyama; Ilya J Finkelstein; Alexei Goun; Brian L McClain; Roger F Loring; M D Fayer
Journal:  J Am Chem Soc       Date:  2003-11-12       Impact factor: 15.419

3.  Dynamics of hemoglobin in human erythrocytes and in solution: influence of viscosity studied by ultrafast vibrational echo experiments.

Authors:  Brian L McClain; Ilya J Finkelstein; M D Fayer
Journal:  J Am Chem Soc       Date:  2004-12-08       Impact factor: 15.419

4.  Temperature-dependent studies of NO recombination to heme and heme proteins.

Authors:  Dan Ionascu; Flaviu Gruia; Xiong Ye; Anchi Yu; Florin Rosca; Chris Beck; Andrey Demidov; John S Olson; Paul M Champion
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

5.  Dynamics of proteins encapsulated in silica sol-gel glasses studied with IR vibrational echo spectroscopy.

Authors:  Aaron M Massari; Ilya J Finkelstein; Michael D Fayer
Journal:  J Am Chem Soc       Date:  2006-03-29       Impact factor: 15.419

6.  The distal residue-CO interaction in carbonmonoxy myoglobins: a molecular dynamics study of two distal histidine tautomers.

Authors:  P Jewsbury; T Kitagawa
Journal:  Biophys J       Date:  1994-12       Impact factor: 4.033

7.  pH-induced conformational changes of the Fe(2+)-N epsilon (His F8) linkage in deoxyhemoglobin trout IV detected by the Raman active Fe(2+)-N epsilon (His F8) stretching mode.

Authors:  M Bosenbeck; R Schweitzer-Stenner; W Dreybrodt
Journal:  Biophys J       Date:  1992-01       Impact factor: 4.033

8.  Dynamics of carbon monoxide recombination to fully reduced cytochrome c oxidase in plant mitochondria after low-temperature flash photolysis.

Authors:  M Denis; P Richaud
Journal:  Biochem J       Date:  1982-08-15       Impact factor: 3.857

9.  Structural heterogeneity of the Fe(2+)-N epsilon (HisF8) bond in various hemoglobin and myoglobin derivatives probed by the Raman-active iron histidine stretching mode.

Authors:  H Gilch; R Schweitzer-Stenner; W Dreybrodt
Journal:  Biophys J       Date:  1993-10       Impact factor: 4.033

10.  Effects of crystallization on the heme-carbon monoxide moiety of bovine heart cytochrome c oxidase carbonyl.

Authors:  M Tsubaki; K Shinzawa; S Yoshikawa
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

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