Literature DB >> 6935674

Tissue-specific DNA methylation in a cluster of rabbit beta-like globin genes.

C K Shen, T Maniatis.   

Abstract

The relationship between DNA methylation and differential expression of rabbit beta-like globin genes was studied by using restriction enzymes that cleave the sequence C-C-G-G but are differentially inhibited by the presence of 5-methylcytosine. The methylation frequency of 13 C-C-G-G sites that flank a set of four closely linked rabbit beta-like globin genes was determined. This analysis revealed that certain sites surrounding embryonic and adult globin genes are relatively undermethylated in DNA from embryonic and adult erythroid tissues, respectively. This pattern is most pronounced for three sites that are undermethylated in erythroid cells but are totally methylated in nonerythroid cells. We conclude that the degree of CpG methylation in the rabbit beta-like globin gene cluster is correlated with gene activity, but the effect is confined to relatively small regions of DNA.

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Year:  1980        PMID: 6935674      PMCID: PMC350341          DOI: 10.1073/pnas.77.11.6634

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

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Authors:  A D Riggs
Journal:  Cytogenet Cell Genet       Date:  1975

Review 2.  Selective silencing of eukaryotic DNA.

Authors:  R Sager; R Kitchin
Journal:  Science       Date:  1975-08-08       Impact factor: 47.728

3.  Embryonic epsilon chains of mice and rabbits.

Authors:  G Steinheider; H Melderis; W Ostertag
Journal:  Nature       Date:  1975-10-23       Impact factor: 49.962

4.  DNA modification mechanisms and gene activity during development.

Authors:  R Holliday; J E Pugh
Journal:  Science       Date:  1975-01-24       Impact factor: 47.728

5.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

6.  Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis.

Authors:  P A Sharp; B Sugden; J Sambrook
Journal:  Biochemistry       Date:  1973-07-31       Impact factor: 3.162

7.  Embryonic and fetal hemoglobin in animals.

Authors:  H Kitchen; I Brett
Journal:  Ann N Y Acad Sci       Date:  1974-11-29       Impact factor: 5.691

8.  The control of gene function in cell differentiation and in embryogenesis.

Authors:  E Scarano
Journal:  Adv Cytopharmacol       Date:  1971-05

9.  A physical map of the DNA regions flanking the rabbit beta-globin gene.

Authors:  A J Jeffreys; R A Flavell
Journal:  Cell       Date:  1977-10       Impact factor: 41.582

10.  Nucleotide sequence of the rightward operator of phage lambda.

Authors:  T Maniatis; A Jeffrey; D G Kleid
Journal:  Proc Natl Acad Sci U S A       Date:  1975-03       Impact factor: 11.205

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  70 in total

1.  MBD2 is a critical component of a methyl cytosine-binding protein complex isolated from primary erythroid cells.

Authors:  Evan P Kransdorf; Shou Zhen Wang; Sheng Zu Zhu; Timothy B Langston; Jeremy W Rupon; Gordon D Ginder
Journal:  Blood       Date:  2006-06-15       Impact factor: 22.113

2.  Active beta-globin gene transcription occurs in methylated, DNase I-resistant chromatin of nonerythroid chicken cells.

Authors:  R Lois; L Freeman; B Villeponteau; H G Martinson
Journal:  Mol Cell Biol       Date:  1990-01       Impact factor: 4.272

3.  CACCC and GATA-1 sequences make the constitutively expressed alpha-globin gene erythroid-responsive in mouse erythroleukemia cells.

Authors:  S Ren; J Li; G F Atweh
Journal:  Nucleic Acids Res       Date:  1996-01-15       Impact factor: 16.971

4.  CpG islands from the alpha-globin gene cluster increase gene expression in an integration-dependent manner.

Authors:  B M Shewchuk; R C Hardison
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

5.  Sequential changes in DNA methylation patterns of the rat phosphoenolpyruvate carboxykinase gene during development.

Authors:  N Benvenisty; D Mencher; O Meyuhas; A Razin; L Reshef
Journal:  Proc Natl Acad Sci U S A       Date:  1985-01       Impact factor: 11.205

6.  Analysis of tissue-specific methylation patterns of mouse mammary tumor virus DNA by two-dimensional Southern blotting.

Authors:  T G Fanning; W S Hu; R D Cardiff
Journal:  J Virol       Date:  1985-06       Impact factor: 5.103

7.  Tissue specificity and clustering of methylated cystosines in bovine satellite I DNA.

Authors:  H Sano; R Sager
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

8.  Estrogen induces a demethylation at the 5' end region of the chicken vitellogenin gene.

Authors:  A F Wilks; P J Cozens; I W Mattaj; J P Jost
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

9.  DNA methylation and gene expression: endogenous retroviral genome becomes infectious after molecular cloning.

Authors:  K Harbers; A Schnieke; H Stuhlmann; D Jähner; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  1981-12       Impact factor: 11.205

10.  BRG1 directly regulates nucleosome structure and chromatin looping of the alpha globin locus to activate transcription.

Authors:  Shin-Il Kim; Emery H Bresnick; Scott J Bultman
Journal:  Nucleic Acids Res       Date:  2009-08-20       Impact factor: 16.971

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