Literature DB >> 6871155

High-resolution proton NMR studies of gangliosides. 2. Use of two-dimensional nuclear Overhauser effect spectroscopy and sialylation shifts for determination of oligosaccharide sequence and linkage sites.

T A Koerner, J H Prestegard, P C Demou, R K Yu.   

Abstract

Homonuclear two-dimensional proton nuclear Overhauser effect (2-D-NOE) spectra have been obtained for asialo-GM2 (4) and gangliosides GM2 (8) and GM1 (9) at 500 MHz and 40 degrees C in Me2SO-d6-D2O (98:2 v/v). The anomeric protons of each oligosaccharide residue of 4, 8, and 9 are observed to NOE couple via intraresidue 1,3- and 1,5-diaxial interactions and interresidue interactions across the glycosidic linkages. The former couplings are used to confirm the H-3 and H-5 assignments for each residue. From the latter couplings the sequence and glycosidic linkage sites of all oligosaccharide residues, except the sialic acid residues, are revealed. Sialic acid attachment sites are determined for the monosialogangliosides (6-9) through consideration of sialylation-induced glycosidation shifts. Combination of the above sequence and linkage-site data with the monosaccharide composition, anomeric configurations, and characterization of the aglycon (information obtained via two-dimensional spin-echo J-correlated spectroscopy or 2-D-SECSY) allows complete assignment of monosialoganglioside primary structure, independent of other methods of structural analysis. Compared to conventional chemical and enzymatic methods, high-resolution two-dimensional proton nuclear magnetic resonance spectroscopy has the advantages of speed, sensitivity, and sample preservation.

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Year:  1983        PMID: 6871155     DOI: 10.1021/bi00280a015

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  1H-NMR study of GM2 ganglioside: evidence that an interresidue amide-carboxyl hydrogen bond contributes to stabilization of a preferred conformation.

Authors:  S B Levery
Journal:  Glycoconj J       Date:  1991-12       Impact factor: 2.916

2.  Properties of ganglioside GM1 in phosphatidylcholine bilayer membranes.

Authors:  R A Reed; G G Shipley
Journal:  Biophys J       Date:  1996-03       Impact factor: 4.033

3.  Glycoconjugate binding of gastric and enterohepatic Helicobacter spp.

Authors:  Sean O Hynes; Susann Teneberg; Niamh Roche; Torkel Wadström
Journal:  Infect Immun       Date:  2003-05       Impact factor: 3.441

4.  Physicochemical characterization of psychosine by 1H nuclear magnetic resonance and electron microscopy.

Authors:  L Orfi; C K Larive; S M LeVine
Journal:  Lipids       Date:  1997-10       Impact factor: 1.880

5.  Presentation of membrane-anchored glycosphingolipids determined from molecular dynamics simulations and NMR paramagnetic relaxation rate enhancement.

Authors:  Mari L Demarco; Robert J Woods; James H Prestegard; Fang Tian
Journal:  J Am Chem Soc       Date:  2010-02-03       Impact factor: 15.419

  5 in total

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