Literature DB >> 6785727

Phylogenetic tree derived from bacterial, cytosol and organelle 5S rRNA sequences.

H Küntzel, M Heidrich, B Piechulla.   

Abstract

A phylogenetic tree was constructed by computer analysis of 47 completely determined 5S rRNA sequences. The wheat mitochondrial sequence is significantly more related to prokaryotic than to eukaryotic sequences, and its affinity to that of the thermophilic Gram-negative bacterium Thermus aquaticus is comparable to the affinity between Anacystis nidulans and chloroplastic sequences. This strongly supports the idea of an endosymbiotic origin of plant mitochondria. A comparison of the plant cytosol and chloroplast sub-trees suggests a similar rate of nucleotide substitution in nuclear genes and chloroplastic genes. Other features of the tree are a common precursor of protozoa and metazoa, which appears to be more related to the fungal than to the plant protosequence, and an early divergence of the archebacterial sequence (Halobacterium cutirubrum) from the prokaryotic branch.

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Year:  1981        PMID: 6785727      PMCID: PMC326769          DOI: 10.1093/nar/9.6.1451

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  The architecture of 5S rRNA and its relation to function.

Authors:  G E Fox; C R Woese
Journal:  J Mol Evol       Date:  1975-10-03       Impact factor: 2.395

2.  Molecular evolution of 5S RNA.

Authors:  H Hori
Journal:  Mol Gen Genet       Date:  1976-05-07

3.  Frequency of insertion-deletion, transversion, and transition in the evolution of 5S ribosomal RNA.

Authors:  D Sankoff; R J Cedergren; G Lapalme
Journal:  J Mol Evol       Date:  1976-03-29       Impact factor: 2.395

4.  Comparison of cytoplasmic and mitochondrial 4 S RNA from cultured hamster cells: physical and metabolic properties.

Authors:  D T Dubin; D A Friend
Journal:  J Mol Biol       Date:  1972-11-14       Impact factor: 5.469

5.  Eukaryotes-prokaryotes divergence estimated by 5S ribosomal RNA sequences.

Authors:  M Kimura; T Ohta
Journal:  Nat New Biol       Date:  1973-06-13

6.  Isolation and characterization of mitochondrial ribosomes from higher plants.

Authors:  C J Leaver; M A Harmey
Journal:  Biochem J       Date:  1972-09       Impact factor: 3.857

Review 7.  Construction of phylogenetic trees.

Authors:  W M Fitch; E Margoliash
Journal:  Science       Date:  1967-01-20       Impact factor: 47.728

8.  Absence of a 5S RNA complnent in the mitochondrial ribosomes of Neurospora crassa.

Authors:  P M Lizardi; D J Luck
Journal:  Nat New Biol       Date:  1971-02-03

Review 9.  Evolution of 5sRNA.

Authors:  H Hori
Journal:  J Mol Evol       Date:  1975-12-31       Impact factor: 2.395

10.  Nucleotide sequence of 5S ribosomal RNA from Aspergillus nidulans and Neurospora crassa.

Authors:  B Piechulla; U Hahn; L W McLaughlin; H Küntzel
Journal:  Nucleic Acids Res       Date:  1981-03-25       Impact factor: 16.971

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  33 in total

1.  Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome.

Authors:  Carlos W Nossa; William E Oberdorf; Liying Yang; Jørn A Aas; Bruce J Paster; Todd Z Desantis; Eoin L Brodie; Daniel Malamud; Michael A Poles; Zhiheng Pei
Journal:  World J Gastroenterol       Date:  2010-09-07       Impact factor: 5.742

2.  The evolutionary history of the structure of 5S ribosomal RNA.

Authors:  Feng-Jie Sun; Gustavo Caetano-Anollés
Journal:  J Mol Evol       Date:  2009-07-29       Impact factor: 2.395

3.  The structure of the gene for subunit I of cytochrome c oxidase in Neurospora crassa mitochondria.

Authors:  J C de Jonge; H de Vries
Journal:  Curr Genet       Date:  1983-03       Impact factor: 3.886

4.  A view of early cellular evolution.

Authors:  R Mikelsaar
Journal:  J Mol Evol       Date:  1987       Impact factor: 2.395

5.  Construction of the mycoplasma evolutionary tree from 5S rRNA sequence data.

Authors:  M J Rogers; J Simmons; R T Walker; W G Weisburg; C R Woese; R S Tanner; I M Robinson; D A Stahl; G Olsen; R H Leach
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

6.  Unexpectedly long 14S ribosomal RNA gene in Tetrahymena mitochondria.

Authors:  J Labriola; I Weiss; J Zapatero; Y Suyama
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

7.  Pattern analysis of 5S rRNA.

Authors:  M Eigen; B Lindemann; R Winkler-Oswatitsch; C H Clarke
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

8.  Phylogenetic calibration of the 5' terminal domain of large rRNA achieved by determining twenty eucaryotic sequences.

Authors:  L H Qu; M Nicoloso; J P Bachellerie
Journal:  J Mol Evol       Date:  1988 Dec-1989 Feb       Impact factor: 2.395

9.  Unusual structural features of the 5S ribosomal RNA from Streptococcus cremoris.

Authors:  H Neimark; J Andersen; N Delihas
Journal:  Nucleic Acids Res       Date:  1983-11-11       Impact factor: 16.971

10.  Molecular relationships between closely related strains and species of nematodes.

Authors:  M H Butler; S M Wall; K R Luehrsen; G E Fox; R M Hecht
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

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