Literature DB >> 6761651

Nuclear Overhauser effect study of yeast tRNAVal 1: evidence for uridine-pseudouridine base pairing.

E Schejter, S Roy, V Sánchez, A G Redfield.   

Abstract

The proton NMR spectrum of yeast tRNAVal 1 has been studied using nuclear Overhauser effect (NOE), including comparison of NOE patterns between purine C8 deuterated and nondeuterated samples. Studies of the downfield region enable us to reliably assign many resonances in the acceptor and D stems. Prominent among these reliable assignments is that of the unusual base pair U psi, which is made here for the first time. Other identifications include GU2, U8-A14, the three AU base pairs of the acceptor stem, and N1 and N3 protons of psi 55.

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Year:  1982        PMID： 6761651      PMCID： PMC327086          DOI： 10.1093/nar/10.24.8297

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  17 in total

1.  On the physical basis for ambiguity in genetic coding interactions.

Authors:  H J Grosjean; S de Henau; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1978-02       Impact factor: 11.205

2.  Pulsed FT-NMR double resonance studies of yeast tRNAPhe: specific nuclear Overhauser effects and reinterpretation of low temperature relaxation data.

Authors:  P D Johnston; A G Redfield
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

3.  Three-dimensional tertiary structure of yeast phenylalanine transfer RNA.

Authors:  S H Kim; F L Suddath; G J Quigley; A McPherson; J L Sussman; A H Wang; N C Seeman; A Rich
Journal:  Science       Date:  1974-08-02       Impact factor: 47.728

4.  The corrected nucleotide sequence of valine tRNA from baker's yeast.

Authors:  J Bonnet; J P Ebel; L P Shershneva; A I Krutilina; T V Venkstern; A A Bayev; G Dirheirmer
Journal:  Biochimie       Date:  1974       Impact factor: 4.079

5.  Effects of flanking G . C base pairs on internal Watson-Crick, G . U, and nonbonded base pairs within a short ribonucleic acid duplex.

Authors:  D Alkema; P A Hader; R A Bell; T Neilson
Journal:  Biochemistry       Date:  1982-04-27       Impact factor: 3.162

Review 6.  Transfer RNA in solution: selected topics.

Authors:  P R Schimmel; A G Redfield
Journal:  Annu Rev Biophys Bioeng       Date:  1980

7.  The separation of soluble ribonucleic acids on benzoylated diethylaminoethylcellulose.

Authors:  I Gillam; S Millward; D Blew; M von Tigerstrom; E Wimmer; G M Tener
Journal:  Biochemistry       Date:  1967-10       Impact factor: 3.162

8.  Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.

Authors:  J E Heckman; J Sarnoff; B Alzner-DeWeerd; S Yin; U L RajBhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1980-06       Impact factor: 11.205

9.  Nuclear Overhauser effect in specifically deuterated macromolecules: NMR assay for unusual base pairing in transfer RNA.

Authors:  V Sánchez; A G Redfield; P D Johnston; J Tropp
Journal:  Proc Natl Acad Sci U S A       Date:  1980-10       Impact factor: 11.205

10.  Nuclear magnetic resonance and nuclear Overhauser effect study of yeast phenylalanine transfer ribonucleic acid imino protons.

Authors:  P D Johnston; A G Redfield
Journal:  Biochemistry       Date:  1981-03-03       Impact factor: 3.162
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  2 in total

1.  Nuclear magnetic resonance observation of the triple interaction between A9 and AU12 in yeast tRNAPhe.

Authors:  B S Choi; A G Redfield
Journal:  Nucleic Acids Res       Date:  1985-07-25       Impact factor: 16.971

2.  The structure of the human tRNALys3 anticodon bound to the HIV genome is stabilized by modified nucleosides and adjacent mismatch base pairs.

Authors:  Yann Bilbille; Franck A P Vendeix; Richard Guenther; Andrzej Malkiewicz; Xavier Ariza; Jaume Vilarrasa; Paul F Agris
Journal:  Nucleic Acids Res       Date:  2009-03-26       Impact factor: 16.971
  2 in total

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