Literature DB >> 6748084

T4 DNA polymerase. Rates and processivity on single-stranded DNA templates.

D C Mace, B M Alberts.   

Abstract

Three different methods have been used to determine the rate at which an individual bacteriophage T4 DNA polymerase molecule moves when synthesizing DNA on a single-stranded DNA template chain. These methods agree in suggesting an in vitro rate for this enzyme of about 250 nucleotides per second at 37 degrees C. This rate is close to the rate at which bacteriophage T4 replication forks move in vivo (about 500 nucleotides per second). Comparison with the overall amount of DNA synthesis seen in in vitro reactions reveals that only a small fraction of the T4 DNA polymerase molecules present are synthesizing DNA at any one time. This is explicable in terms of the limited processivity of the enzyme in these reactions, along with its capacity for non-productive DNA binding to the DNA template molecules.

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Year:  1984        PMID: 6748084     DOI: 10.1016/0022-2836(84)90458-3

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  12 in total

Review 1.  Single-molecule studies of DNA replisome function.

Authors:  Senthil K Perumal; Hongjun Yue; Zhenxin Hu; Michelle M Spiering; Stephen J Benkovic
Journal:  Biochim Biophys Acta       Date:  2009-08-07

2.  How a holoenzyme for DNA replication is formed.

Authors:  Senthil K Perumal; Wenhui Ren; Tae-Hee Lee; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-17       Impact factor: 11.205

3.  Persistence of DNA synthesis arrest sites in the presence of T4 DNA polymerase and T4 gene 32, 44, 45 and 62 DNA polymerase accessory proteins.

Authors:  M F Charette; D T Weaver; M L DePamphilis
Journal:  Nucleic Acids Res       Date:  1986-04-25       Impact factor: 16.971

Review 4.  Understanding DNA replication by the bacteriophage T4 replisome.

Authors:  Stephen J Benkovic; Michelle M Spiering
Journal:  J Biol Chem       Date:  2017-09-25       Impact factor: 5.157

5.  Dynamics of DNA-tracking by two sliding-clamp proteins.

Authors:  T J Fu; G M Sanders; M O'Donnell; E P Geiduschek
Journal:  EMBO J       Date:  1996-08-15       Impact factor: 11.598

6.  PCNA accelerates the nucleotide incorporation rate by DNA polymerase δ.

Authors:  Tanumoy Mondol; Joseph L Stodola; Roberto Galletto; Peter M Burgers
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

Review 7.  Processivity factor of DNA polymerase and its expanding role in normal and translesion DNA synthesis.

Authors:  Zhihao Zhuang; Yongxing Ai
Journal:  Biochim Biophys Acta       Date:  2009-07-01

8.  One severe acute respiratory syndrome coronavirus protein complex integrates processive RNA polymerase and exonuclease activities.

Authors:  Lorenzo Subissi; Clara C Posthuma; Axelle Collet; Jessika C Zevenhoven-Dobbe; Alexander E Gorbalenya; Etienne Decroly; Eric J Snijder; Bruno Canard; Isabelle Imbert
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-02       Impact factor: 11.205

9.  Isothermal DNA amplification using the T4 replisome: circular nicking endonuclease-dependent amplification and primase-based whole-genome amplification.

Authors:  Yolanda Schaerli; Viktor Stein; Michelle M Spiering; Stephen J Benkovic; Chris Abell; Florian Hollfelder
Journal:  Nucleic Acids Res       Date:  2010-10-04       Impact factor: 16.971

Review 10.  Coordinated DNA Replication by the Bacteriophage T4 Replisome.

Authors:  Erin Noble; Michelle M Spiering; Stephen J Benkovic
Journal:  Viruses       Date:  2015-06-19       Impact factor: 5.048

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