Literature DB >> 6745242

Structure and in vitro transcription of a glycine tRNA gene from Bombyx mori.

A Fournier, M A Guérin, J Corlet, S G Clarkson.   

Abstract

We report the sequences of a Bombyx mori tRNA1Gly gene, its flanking regions, and its in vitro transcription products. The 5' flanking DNA contains the sequences TATAC, TATTTT and TTC located 30, 18 and 4 nucleotides, respectively, in front of the transcription initiation site. These resemble, in both position and composition, sequences preceding other RNA polymerase III genes of B. mori. A deletion mutant retaining these conserved sequences and an additional 8 bp of flanking DNA is transcribed better than the wild-type gene in cell-free extracts from Xenopus laevis and B. mori. A mutant lacking the conserved sequences is expressed in the frog extract, but is inactive in the homologous system.

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Year:  1984        PMID: 6745242      PMCID: PMC557557          DOI: 10.1002/j.1460-2075.1984.tb02009.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  27 in total

1.  Functional adaptation of tRNA population.

Authors:  J P Garel
Journal:  J Theor Biol       Date:  1974-01       Impact factor: 2.691

2.  Absence of the sequence G-T-psi-C-G(A)- in several eukaryotic cytoplasmic initiator transfer RNAs.

Authors:  M Simsek; J Ziegenmeyer; J Heckman; U L Rajbhandary
Journal:  Proc Natl Acad Sci U S A       Date:  1973-04       Impact factor: 11.205

3.  The extent of a eukaryotic tRNA gene. 5'- and 3'-flanking sequence dependence for transcription and stable complex formation.

Authors:  J Schaack; S Sharp; T Dingermann; D J Burke; L Cooley; D Söll
Journal:  J Biol Chem       Date:  1984-02-10       Impact factor: 5.157

4.  A control region in the center of the 5S RNA gene directs specific initiation of transcription: I. The 5' border of the region.

Authors:  S Sakonju; D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1980-01       Impact factor: 41.582

5.  A short 5' flanking region containing conserved sequences is required for silkworm alanine tRNA gene activity.

Authors:  D Larson; J Bradford-Wilcox; L S Young; K U Sprague
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205

6.  5'-flanking sequences that inhibit in vitro transcription of a xenopus laevis tRNA gene.

Authors:  R A Hipskind; S G Clarkson
Journal:  Cell       Date:  1983-10       Impact factor: 41.582

7.  5' flanking sequence signals are required for activity of silkworm alanine tRNA genes in homologous in vitro transcription systems.

Authors:  K U Sprague; D Larson; D Morton
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

8.  Silkworm 5S RNA and alanine tRNA genes share highly conserved 5' flanking and coding sequences.

Authors:  D G Morton; K U Sprague
Journal:  Mol Cell Biol       Date:  1982-12       Impact factor: 4.272

9.  Nucleotide sequences in Xenopus 5S DNA required for transcription termination.

Authors:  D F Bogenhagen; D D Brown
Journal:  Cell       Date:  1981-04       Impact factor: 41.582

10.  The primary transcription product of a silkworm alanine tRNA gene: identification of in vitro sites of initiation, termination and processing.

Authors:  O Hagenbüchle; D Larson; G I Hall; K U Sprague
Journal:  Cell       Date:  1979-12       Impact factor: 41.582

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  10 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Sequence of a lysine tRNA gene from Bombyx mori.

Authors:  A Fournier; M A Guérin; J Corlet; S G Clarkson
Journal:  Nucleic Acids Res       Date:  1986-02-25       Impact factor: 16.971

3.  Upstream sequences confer distinctive transcriptional properties on genes encoding silkgland-specific tRNAAla.

Authors:  L S Young; N Takahashi; K U Sprague
Journal:  Proc Natl Acad Sci U S A       Date:  1986-01       Impact factor: 11.205

4.  Sequence of a glutamic acid tRNA gene from Bombyx mori.

Authors:  J Corlet; S G Clarkson; A Fournier; M A Guérin
Journal:  Nucleic Acids Res       Date:  1986-02-25       Impact factor: 16.971

5.  Silkworm TFIIIB binds both constitutive and silk gland-specific tRNA Ala promoters but protects only the constitutive promoter from DNase I cleavage.

Authors:  L S Young; N Ahnert; K U Sprague
Journal:  Mol Cell Biol       Date:  1996-03       Impact factor: 4.272

6.  Transcription of a silkworm tRNA(cAla) gene is directed by two AT-rich upstream sequence elements.

Authors:  F A Palida; C Hale; K U Sprague
Journal:  Nucleic Acids Res       Date:  1993-12-25       Impact factor: 16.971

7.  In vitro transcription of a silkworm 5S RNA gene requires an upstream signal.

Authors:  D G Morton; K U Sprague
Journal:  Proc Natl Acad Sci U S A       Date:  1984-09       Impact factor: 11.205

8.  Regulation of glycine tRNA gene expression in the posterior silk glands of the silkworm Bombyx mori.

Authors:  R Taneja; R Gopalkrishnan; K P Gopinathan
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-01       Impact factor: 11.205

9.  Transcriptional properties of BmX, a moderately repetitive silkworm gene that is an RNA polymerase III template.

Authors:  E T Wilson; D P Condliffe; K U Sprague
Journal:  Mol Cell Biol       Date:  1988-02       Impact factor: 4.272

10.  Conserved sequences in both coding and 5' flanking regions of mammalian opal suppressor tRNA genes.

Authors:  K Pratt; F C Eden; K H You; V A O'Neill; D Hatfield
Journal:  Nucleic Acids Res       Date:  1985-07-11       Impact factor: 16.971

  10 in total

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