Literature DB >> 673855

Simplified methods for large scale enzymatic synthesis of oligoribonucleotides.

B W Shum, D M Crothers.   

Abstract

We report simplified methods for large scale enzymatic synthesis of oligoribonucleotides using polynucleotide phosphorylase. The main features of the method are use of RPC-5 chromatography, including chromatography at two pH values to deal with the problem of primer phosphorolysis, rapid dialysis for large scale desalting, simplified methods for enzyme removal, and high resolution 1H and 31P NMR for product identification and demonstration of purity. The capacity of the method is adequate to allow beginning with grams of material in the first polymerization step, so that product yields of several milligrams, sufficient for many physical studies, are possible after as many as three separate polymerization reactions.

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Year:  1978        PMID: 673855      PMCID: PMC342164          DOI: 10.1093/nar/5.7.2297

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  16 in total

1.  Desalting of RPC-5 oligonucleotides on Dowex 50.

Authors:  J Augustyniak; Z Janowicz; D Labuda; J Wower
Journal:  Anal Biochem       Date:  1975-11       Impact factor: 3.365

2.  Equimolar addition of oligoribonucleotides with T4 RNA ligase.

Authors:  O C Uhlenbeck; V Cameron
Journal:  Nucleic Acids Res       Date:  1977-01       Impact factor: 16.971

3.  Enzymatic synthesis of oligonucleotides of defined sequence. Addition of short blocks of nucleotide residues to oligonucleotide primers.

Authors:  S Gillam; K Waterman; M Smith
Journal:  Nucleic Acids Res       Date:  1975-05       Impact factor: 16.971

4.  A deoxyadenylate kinase activity associated with polynucleotide phosphorylase from Micrococcus luteus.

Authors:  J E Craine; C B Klee
Journal:  Nucleic Acids Res       Date:  1976-11       Impact factor: 16.971

5.  The isolation and sequence analysis of transfer RNA: the use of plaskon chromatography (RPC-5).

Authors:  B Roe; K Marcu; B Dudock
Journal:  Biochim Biophys Acta       Date:  1973-08-10

6.  Anion-exchange chromatography on reversed-phase columns: isolation and assay of nucleosides, nucleotides, and oligonucleotides from nucleic acids and from cytoplasm.

Authors:  R P Singhal
Journal:  Biochim Biophys Acta       Date:  1973-08-10

7.  2'-O-(alpha-methoxyethyl)nucleoside 5'-diphosphates as "single-addition" substrates in the synthesis of specific oligoribonucleotides with polynucleotide phosphorylase.

Authors:  G N Bennett; J K Mackey; J L Wiebers; P T Gilham
Journal:  Biochemistry       Date:  1973-09-25       Impact factor: 3.162

8.  T4-induced RNA ligase joins single-stranded oligoribonucleotides.

Authors:  G C Walker; O C Uhlenbeck; E Bedows; R I Gumport
Journal:  Proc Natl Acad Sci U S A       Date:  1975-01       Impact factor: 11.205

9.  Chemical and enzymatic synthesis of lactose operator of Escherichia coli and its binding to lactose repressor.

Authors:  C P Bahl; R Wu; K Itakura; N Katagiri; S A Narang
Journal:  Proc Natl Acad Sci U S A       Date:  1976-01       Impact factor: 11.205

10.  Phosphorus-31 Fourier transform nuclear magnetic resonance study of mononucleotides and dinucleotides. 1. Chemical shifts.

Authors:  P J Cozzone; O Jardetzky
Journal:  Biochemistry       Date:  1976-11-02       Impact factor: 3.162

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  1 in total

1.  Reverse-phase HPLC of DNA restriction fragments and ribooligonucleotides on uncoated Kel-F powder.

Authors:  D A Usher
Journal:  Nucleic Acids Res       Date:  1979       Impact factor: 16.971

  1 in total

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