Literature DB >> 6735176

A new and improved method for 3'-end labelling DNA using [alpha-32P]ddATP.

S I Yousaf, A R Carroll, B E Clarke.   

Abstract

We have synthesised dideoxyadenosine-5'-[alpha-32P]triphosphate [( alpha-32P] ddATP ) at a specific activity of 3000 Ci/mmol and directly compared it with cordycepin-5'-[alpha-32P]triphosphate [( alpha-32P] KTP ) as a means to 3'-end label DNA. The [alpha-32P] ddATP was found to be three to five times more efficient than [alpha-32P] KTP . Blunt and 3'-protruding ends were labelled more efficiently with [alpha-32P] ddATP using terminal transferase than were the 5'-ends with [gamma-32P]ATP using polynucleotide kinase by standard methods. This improvement in efficiency of labelling DNA and the simplicity of the method allows 3'-end labelling of DNA to become a realistic alternative to 5'-end labelling. We have also compared [alpha-32P] ddATP - and [alpha-32P] KTP -labelled DNA in Maxam and Gilbert sequencing procedures and find that both give equally good results.

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Year:  1984        PMID: 6735176     DOI: 10.1016/0378-1119(84)90075-1

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  27 in total

1.  mRNA coding for oxytocin is present in axons of the hypothalamo-neurohypophysial tract.

Authors:  G F Jirikowski; P P Sanna; F E Bloom
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2.  Silencer region of a chalcone synthase promoter contains multiple binding sites for a factor, SBF-1, closely related to GT-1.

Authors:  M A Lawton; S M Dean; M Dron; J M Kooter; K M Kragh; M J Harrison; L Yu; L Tanguay; R A Dixon; C J Lamb
Journal:  Plant Mol Biol       Date:  1991-02       Impact factor: 4.076

3.  Complete sequence of IS3.

Authors:  K P Timmerman; C P Tu
Journal:  Nucleic Acids Res       Date:  1985-03-25       Impact factor: 16.971

4.  Length variation and heteroplasmy are frequent in mitochondrial DNA from parthenogenetic and bisexual lizards (genus Cnemidophorus).

Authors:  L D Densmore; J W Wright; W M Brown
Journal:  Genetics       Date:  1985-08       Impact factor: 4.562

5.  Isolation of a cDNA clone for the human lysosomal proteinase cathepsin B.

Authors:  D Fong; D H Calhoun; W T Hsieh; B Lee; R D Wells
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

6.  An excision event that may depend on patchy homology for site specificity.

Authors:  D Bourgaux-Ramoisy; D Gendron; P Chartrand; P Bourgaux
Journal:  Mol Cell Biol       Date:  1986-07       Impact factor: 4.272

7.  Unexpectedly long 14S ribosomal RNA gene in Tetrahymena mitochondria.

Authors:  J Labriola; I Weiss; J Zapatero; Y Suyama
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

8.  Sequence of the Pseudomonas aeruginosa trpI activator gene and relatedness of trpI to other procaryotic regulatory genes.

Authors:  M Chang; A Hadero; I P Crawford
Journal:  J Bacteriol       Date:  1989-01       Impact factor: 3.490

9.  Reduced cleavage by sodium hydroxide of methyladenine in DNA sequencing.

Authors:  N Okawa; Y Suyama; A Kaji
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971

10.  Transcription initiation and RNA processing of a yeast mitochondrial tRNA gene cluster.

Authors:  R Bordonné; G Dirheimer; R P Martin
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

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