Literature DB >> 6733249

Quasi-harmonic method for studying very low frequency modes in proteins.

R M Levy, A R Srinivasan, W K Olson, J A McCammon.   

Abstract

Mesh:

Substances:

Year:  1984        PMID: 6733249     DOI: 10.1002/bip.360230610

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


× No keyword cloud information.
  56 in total

1.  Quantifying uncertainty and sampling quality in biomolecular simulations.

Authors:  Alan Grossfield; Daniel M Zuckerman
Journal:  Annu Rep Comput Chem       Date:  2009-01-01

2.  Dynamical allosterism in the mechanism of action of DNA mismatch repair protein MutS.

Authors:  Susan N Pieniazek; Manju M Hingorani; D L Beveridge
Journal:  Biophys J       Date:  2011-10-05       Impact factor: 4.033

3.  Normal modes for predicting protein motions: a comprehensive database assessment and associated Web tool.

Authors:  Vadim Alexandrov; Ursula Lehnert; Nathaniel Echols; Duncan Milburn; Donald Engelman; Mark Gerstein
Journal:  Protein Sci       Date:  2005-03       Impact factor: 6.725

4.  Probing the local dynamics of nucleotide-binding pocket coupled to the global dynamics: myosin versus kinesin.

Authors:  Wenjun Zheng; Bernard R Brooks
Journal:  Biophys J       Date:  2005-05-06       Impact factor: 4.033

5.  Topographical complexity of multidimensional energy landscapes.

Authors:  Gareth J Rylance; Roy L Johnston; Yasuhiro Matsunaga; Chun-Biu Li; Akinori Baba; Tamiki Komatsuzaki
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-28       Impact factor: 11.205

6.  A computational analysis of binding modes and conformation changes of MDM2 induced by p53 and inhibitor bindings.

Authors:  Jianzhong Chen; Jinan Wang; Weiliang Zhu; Guohui Li
Journal:  J Comput Aided Mol Des       Date:  2013-11-22       Impact factor: 3.686

7.  Molecular motions of human HIV-1 gp120 envelope glycoproteins.

Authors:  Shu-Qun Liu; Shi-Xi Liu; Yun-Xin Fu
Journal:  J Mol Model       Date:  2008-07-02       Impact factor: 1.810

8.  Molecular dynamics simulation of the Escherichia coli NikR protein: equilibrium conformational fluctuations reveal interdomain allosteric communication pathways.

Authors:  Michael J Bradley; Peter T Chivers; Nathan A Baker
Journal:  J Mol Biol       Date:  2008-03-14       Impact factor: 5.469

9.  Correspondences between low-energy modes in enzymes: dynamics-based alignment of enzymatic functional families.

Authors:  Andrea Zen; Vincenzo Carnevale; Arthur M Lesk; Cristian Micheletti
Journal:  Protein Sci       Date:  2008-03-27       Impact factor: 6.725

10.  Principal component analysis for protein folding dynamics.

Authors:  Gia G Maisuradze; Adam Liwo; Harold A Scheraga
Journal:  J Mol Biol       Date:  2008-10-15       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.