Novel carbohydrate structures of cathepsin B from porcine spleen.

Two 13-residue glycopeptides were isolated from the digestion of purified porcine spleen cathepsin B by Staphylococcus aureus protease using high performance liquid chromatography. The major peptide, which is about 73% of the total, had the amino acid sequence His-His-Val-Asn(CH2O)-Gly-Ser-Arg-Pro-Pro-Cys-Thr-Gly-Glu. This peptide contains only a single N-acetylglucosamine residue linked to asparagine at the fourth residue by a beta-linkage. The minor peptide had a single amino acid replacement in a sequence otherwise identical to that of the major peptide. A serine was found at residue 10 instead of a half-cystine. The minor peptide also contains different carbohydrates, which were determined using proton NMR to be Man alpha 1----6 Man beta 1----4 GlcNAc beta 1----4(Fuc alpha 1----6)GlcNAc beta 1----n Asn. These results suggest that the cathepsin B carbohydrates are processed in vivo by enzymic systems specific to each isozyme.