Literature DB >> 6709498

Critical amount of oligovalent ion binding required for the B-Z transition of poly (dG-m5dC).

H H Chen, M J Behe, D C Rau.   

Abstract

By working at very low Na+ concentrations (1mM and less), the number of bound Mg(2+), cobalt hexamine (3+), and spermine (4+) necessary to induce the B-Z transition of poly (dG-m5dC) has been directly measured. The results show that if as little as 1 cobalt hexamine(3+) or spermine(4+) is bound per 40-50 nucleotides the transition will occur. A greater fraction of bound Mg(2+) is required, 1 bound Mg(2+)/10 nucleotides. The dependence of the transition midpoint concentrations of oligovalent ions on Na+ concentrations suggests that specific ion binding energies, not included in counterion condensation theory, are responsible for the transition.

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Year:  1984        PMID: 6709498      PMCID: PMC318669          DOI: 10.1093/nar/12.5.2381

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  10 in total

1.  Mg NMR in DNA solutions: Dominance of site binding effects.

Authors:  D M Rose; M L Bleam; M T Record; R G Bryant
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

Review 2.  The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides.

Authors:  G S Manning
Journal:  Q Rev Biophys       Date:  1978-05       Impact factor: 5.318

3.  Circular dichroism of mitomycin-DNA complexes. Evidence for a conformational change in DNA.

Authors:  C M Mercado; M Tomasz
Journal:  Biochemistry       Date:  1977-05-03       Impact factor: 3.162

4.  Counterion-induced condesation of deoxyribonucleic acid. a light-scattering study.

Authors:  R W Wilson; V A Bloomfield
Journal:  Biochemistry       Date:  1979-05-29       Impact factor: 3.162

5.  The binding of Mg++ ions to polyadenylate, polyuridylate, and their complexes.

Authors:  H Krakauer
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

6.  Interactions of DNA with divalent metal ions. III. Extent of metal binding: experiment and theory.

Authors:  J Granot; D R Kearns
Journal:  Biopolymers       Date:  1982-01       Impact factor: 2.505

7.  Comparison of polyelectrolyte theories of the binding of cations to DNA.

Authors:  R W Wilson; D C Rau; V A Bloomfield
Journal:  Biophys J       Date:  1980-05       Impact factor: 4.033

8.  Spermidine-Deoxyribonucleic acid interaction in vitro and in Escherichia coli.

Authors:  R L Rubin
Journal:  J Bacteriol       Date:  1977-02       Impact factor: 3.490

9.  Induction of the Z conformation in poly(dG-dC).poly(dG-dC) by binding of N-2-acetylaminofluorene to guanine residues.

Authors:  R M Santella; D Grunberger; I B Weinstein; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

10.  Effects of methylation on a synthetic polynucleotide: the B--Z transition in poly(dG-m5dC).poly(dG-m5dC).

Authors:  M Behe; G Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

  10 in total
  10 in total

1.  A unified theory of the B-Z transition of DNA in high and low concentrations of multivalent ions.

Authors:  M Guéron; J Demaret; M Filoche
Journal:  Biophys J       Date:  2000-02       Impact factor: 4.033

2.  Ternary interactions of spermine with DNA: 4'-epiadriamycin and other DNA: anthracycline complexes.

Authors:  L D Williams; C A Frederick; G Ughetto; A Rich
Journal:  Nucleic Acids Res       Date:  1990-09-25       Impact factor: 16.971

3.  Spermine-DNA interactions: a theoretical study.

Authors:  B G Feuerstein; N Pattabiraman; L J Marton
Journal:  Proc Natl Acad Sci U S A       Date:  1986-08       Impact factor: 11.205

4.  Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.

Authors:  S Thiyagarajan; S S Rajan; N Gautham
Journal:  Nucleic Acids Res       Date:  2004-11-08       Impact factor: 16.971

5.  New DNA polymorphism: evidence for a low salt, left-handed form of poly(dG-m5dC).

Authors:  B G Feuerstein; L J Marton; M A Keniry; D L Wade; R H Shafer
Journal:  Nucleic Acids Res       Date:  1985-06-11       Impact factor: 16.971

6.  A stopped-flow H-D exchange kinetic study of spermine-polynucleotide interactions.

Authors:  H S Basu; R H Shafer; L J Marton
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

7.  The low ionic strength form of the sodium salt of poly(dm5C-dG) is a B DNA.

Authors:  A Woisard; W Guschlbauer; G V Fazakerley
Journal:  Nucleic Acids Res       Date:  1986-04-25       Impact factor: 16.971

8.  The structure of d(CACACG).d(CGTGTG).

Authors:  S Venkadesh; P K Mandal; N Gautham
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-12-25

9.  Conformational lability of poly(dG-m5dC):poly(dG-m5dC).

Authors:  F M Chen
Journal:  Nucleic Acids Res       Date:  1986-06-25       Impact factor: 16.971

10.  Polyamine-DNA Interactions: Possible Site of New Cancer Chemotherapeutic Intervention.

Authors:  L J Marton; B G Feuerstein
Journal:  Pharm Res       Date:  1986-12       Impact factor: 4.200

  10 in total

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