Literature DB >> 6701098

Comparative structural analysis of cytidine, ethenocytidine and their protonated salts III. 1H, 13C and 15N NMR studies at natural isotope abundance.

L Kozerski, H Sierzputowska-Gracz, W Krzyzosiak, M Bratek-Wiewiórowska, M Jaskólski, M Wiewiórowski.   

Abstract

The 1H, 13C, 15N NMR spectra of cytidine /Cyd/, ethenocytidine /epsilon Cyd/ and their hydrochlorides /Cyd X HC1/ and /epsilon Cyd X HC1/ have been analysed to compare structural differences observed in solution with those existing in the crystalline state. The effects of ethenobridging and protonation of the hertero-aromatic base on the intramolecular stereochemistry, intermolecular interactions and electronic structure of the whole molecule are discussed on the basis of the NMR studies in DMSO solutions. Particular interest is devoted to the discussion of the conformation of the ribose ring, the presence of the intramolecular C-5'-0...H-6-C hydrogen bond, unambiguous assignment of the site of protonation, the mechanism of the 5C-H deuterium exchange in Cyd X HC1, and the intermolecular interactions in solution.

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Year:  1984        PMID: 6701098      PMCID: PMC318652          DOI: 10.1093/nar/12.4.2205

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  7 in total

1.  Species responsible for the fluorescence of 3,N4-ethenocytidine.

Authors:  J R Barrio; P D Sattsangi; B A Gruber; L G Dammann; N J Leonard
Journal:  J Am Chem Soc       Date:  1976-11-10       Impact factor: 15.419

2.  Determination of the tautomeric form of the imidazole ring of L-histidine in basic solution by carbon-13 magnetic resonance spectroscopy.

Authors:  W F Reynolds; I R Peat; M H Freedman; J R Lyerla
Journal:  J Am Chem Soc       Date:  1973-01-24       Impact factor: 15.419

3.  Conformational analysis of cytidine, 1-beta-D-(arabinofuranosyl)cytosine and their O'-methyl derivatives by proton magnetic resonance spectroscopy.

Authors:  M Remin; D Shugar
Journal:  J Am Chem Soc       Date:  1973-11-28       Impact factor: 15.419

4.  Nitrogen-15 nuclear magnetic resonance spectroscopy of some nucleosides and nucleotides.

Authors:  V Markowski; G R Sullivan; J D Roberts
Journal:  J Am Chem Soc       Date:  1977-02-02       Impact factor: 15.419

5.  Reactions of cytosine derivatives with acidic buffer solutions. II. Studies on transamination, deamination, and deuterium exchange.

Authors:  R Shapiro; R S Klein
Journal:  Biochemistry       Date:  1967-11       Impact factor: 3.162

6.  Comparative structural analysis of cytidine, ethenocytidine and their protonated salts. II. IR spectral studies.

Authors:  W Krzyzosiak; M Jaskólski; H Sierzputowska-Gracz; M Wiewiórowski
Journal:  Nucleic Acids Res       Date:  1982-04-24       Impact factor: 16.971

7.  Comparative structural analysis of cytidine, ethenocytidine, and their protonated salts. I. Crystal and molecular structure of ethenocytidine.

Authors:  M Jaskólski; W Krzyzosiak; H Sierzputowska-Gracz; M Wiewiórowski
Journal:  Nucleic Acids Res       Date:  1981-10-24       Impact factor: 16.971

  7 in total
  4 in total

1.  Formation of fused-ring 2'-deoxycytidine adducts from 1-chloro-3-buten-2-one, an in vitro 1,3-butadiene metabolite, under in vitro physiological conditions.

Authors:  Liang Sun; Avishay Pelah; Dong-Ping Zhang; Yu-Fang Zhong; Jing An; Ying-Xin Yu; Xin-Yu Zhang; Adnan A Elfarra
Journal:  Chem Res Toxicol       Date:  2013-09-25       Impact factor: 3.739

2.  Comparative structural analysis of 1-methyladenosine, 7-methylguanosine, ethenoadenosine and their protonated salts IV: 1H, 13C, and 15N NMR studies at natural isotope abundance.

Authors:  H Sierzputowska-Gracz; H D Gopal; P F Agris
Journal:  Nucleic Acids Res       Date:  1986-10-10       Impact factor: 16.971

3.  A new oxygen modification cyclooctaoxygen binds to nucleic acids as sodium crown complex.

Authors:  Andreas J Kesel; Craig W Day; Catherine M Montero; Raymond F Schinazi
Journal:  Biochim Biophys Acta       Date:  2016-01-26

4.  Multinuclear NMR Measurements and DFT Calculations for Capecitabine Tautomeric Form Assignment in a Solution.

Authors:  Piotr Cmoch; Piotr Krzeczyński; Andrzej Leś
Journal:  Molecules       Date:  2018-01-13       Impact factor: 4.411

  4 in total

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