Literature DB >> 6692823

Studies on the dynamic syn-anti equilibrium in purine nucleosides and nucleotides with the aid of 1H and 13C NMR spectroscopy.

R Stolarski, C E Hagberg, D Shugar.   

Abstract

Analyses of 1H and 13C NMR spectra have been utilized to extend studies on the dynamic equilibrium syn-anti about the glycosidic bond of purine nucleosides and nucleotides. With the aid of chemically synthesized model analogous in fixed syn and anti conformations, and the introduction of appropriate corrections for the conformation of the exocyclic chain of the sugar moiety, it is possible to evaluate quantitatively the relative populations of the syn and anti conformers from the experimentally observed chemical shifts of H(2') and C(2'). The resulting agreement between the data based on H(2') chemical shifts with those deduced from C(2') chemical shifts extends the validity of this procedure, and furnishes more accurate results than those previously based on uncorrected H(2') chemical shifts alone. The overall findings are briefly compared with those derived from measurements of proton relaxation times and the Overhauser effect, as well as by X-ray diffraction in the solid state. Attention is drawn to the potential utility of the results, including chemical shift data, in studies on interactions of nucleosides and nucleotides with appropriate enzyme systems.

Entities:  

Mesh:

Substances:

Year:  1984        PMID: 6692823     DOI: 10.1111/j.1432-1033.1984.tb07898.x

Source DB:  PubMed          Journal:  Eur J Biochem        ISSN: 0014-2956


  7 in total

1.  Calculations of binding affinity between C8-substituted GTP analogs and the bacterial cell-division protein FtsZ.

Authors:  Jozef Hritz; Tilman Läppchen; Chris Oostenbrink
Journal:  Eur Biophys J       Date:  2010-06-18       Impact factor: 1.733

2.  Unique active site promotes error-free replication opposite an 8-oxo-guanine lesion by human DNA polymerase iota.

Authors:  Kevin N Kirouac; Hong Ling
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-07       Impact factor: 11.205

3.  Heterocycle-modified 2'-Deoxyguanosine Nucleolipid Analogs Stabilize Guanosine Gels and Self-assemble to Form Green Fluorescent Gels.

Authors:  Manisha B Walunj; Seergazhi G Srivatsan
Journal:  Chem Asian J       Date:  2021-12-16

4.  Conformation, hydrogen bonding and aggregate formation of guanosine 5'-monophosphate and guanosine in dimethylsulfoxide.

Authors:  R T West; L A Garza; W R Winchester; J A Walmsley
Journal:  Nucleic Acids Res       Date:  1994-11-25       Impact factor: 16.971

5.  Structure-activity relationship of cytoplasmic 5'-nucleotidase substrate sites.

Authors:  A C Skladanowski; C Hoffmann; J Krass; B Jastorff; W Makarewicz
Journal:  Biochem J       Date:  1996-03-15       Impact factor: 3.857

6.  Highly fluorescent guanosine mimics for folding and energy transfer studies.

Authors:  Anaëlle Dumas; Nathan W Luedtke
Journal:  Nucleic Acids Res       Date:  2011-05-06       Impact factor: 16.971

7.  RNA force field with accuracy comparable to state-of-the-art protein force fields.

Authors:  Dazhi Tan; Stefano Piana; Robert M Dirks; David E Shaw
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-29       Impact factor: 11.205

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.