Literature DB >> 6687857

A fast method for arranging DNA sequence fragments.

G Osterburg, K H Glatting, J Buchert, J Wolters.   

Abstract

A method is described which allows efficient arrangement of DNA sequence fragments and, based on this arrangement, reconstruction of a complete DNA sequence. The concepts and algorithms used are based on the mathematical theory of graphs. The amount of human interaction required is considerably reduced compared to existing methods. An experiment with a set of 168 fragments yields a DNA sequence of about 5800 bases almost automatically.

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Year:  1983        PMID: 6687857     DOI: 10.1016/0010-468x(83)90010-7

Source DB:  PubMed          Journal:  Comput Programs Biomed        ISSN: 0010-468X


  4 in total

1.  Cloning and DNA sequence of sigB gene of Stigmatella aurantiaca.

Authors:  H Skladny; M Heidelbach; H U Schairer
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

2.  Coding sequence and flanking regions of the mouse vimentin gene.

Authors:  H Hennekes; S Kühn; P Traub
Journal:  Mol Gen Genet       Date:  1990-03

3.  Biochemical and molecular characterization of the Clostridium magnum acetoin dehydrogenase enzyme system.

Authors:  N Krüger; F B Oppermann; H Lorenzl; A Steinbüchel
Journal:  J Bacteriol       Date:  1994-06       Impact factor: 3.490

4.  DNA sequence and genome organization of genital human papillomavirus type 6b.

Authors:  E Schwarz; M Dürst; C Demankowski; O Lattermann; R Zech; E Wolfsperger; S Suhai; H zur Hausen
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

  4 in total

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