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Literature DB >> 6647031

Species-specific homogeneity of the primate Alu family of repeated DNA sequences.

G R Daniels, G M Fox, D Loewensteiner, C W Schmid, P L Deininger.

Abstract

We have determined the base sequence of several cloned Alu family members from the DNAs of a new world monkey (owl monkey) and a prosimian (galago). The three owl monkey Alu family members reported here belong to a single 300 base pair consensus sequence which closely resembles the human Alu family consensus. The galago Alu family members can best be represented as belonging to either of two related but distinct consensus sequences. One of the two galago Alu family subgroups (Type I) more accurately resembles the human consensus sequence than does the other subgroup (Type II). In this work we compare base sequences of human and galago Type I Alu family members. There are several examples of species-specific differences between the human and Type I galago sequences indicating that the Alu family members are effectively homogenized within a species.

Entities: Disease Species

Mesh：

Substances：
DNA

Year: 1983 PMID： 6647031 PMCID： PMC326504 DOI： 10.1093/nar/11.21.7579

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

30 in total

1. Structural analysis of templates and RNA polymerase III transcripts of Alu family sequences interspersed among the human beta-like globin genes.

Authors: C H Duncan; P Jagadeeswaran; R R Wang; S M Weissman
Journal: Gene Date: 1981-03 Impact factor: 3.688

2. Evolution of the beta-globin gene cluster in man and the primates.

Authors: P A Barrie; A J Jeffreys; A F Scott
Journal: J Mol Biol Date: 1981-07-05 Impact factor: 5.469

3. Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors: F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal: J Mol Biol Date: 1980-10-25 Impact factor: 5.469

4. Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.

Authors: S R Haynes; W R Jelinek
Journal: Proc Natl Acad Sci U S A Date: 1981-10 Impact factor: 11.205

5. The nucleotide sequence of the ubiquitous repetitive DNA sequence B1 complementary to the most abundant class of mouse fold-back RNA.

Authors: A S Krayev; D A Kramerov; K G Skryabin; A P Ryskov; A A Bayev; G P Georgiev
Journal: Nucleic Acids Res Date: 1980-03-25 Impact factor: 16.971

6. The use of synthetic oligodeoxynucleotide primers in cloning and sequencing segment of 8 influenza virus (A/PR/8/34).

Authors: G Winter; S Fields; M J Gait; G G Brownlee
Journal: Nucleic Acids Res Date: 1981-01-24 Impact factor: 16.971

7. Analysis of the regions flanking the human insulin gene and sequence of an Alu family member.

Authors: G I Bell; R Pictet; W J Rutter
Journal: Nucleic Acids Res Date: 1980-09-25 Impact factor: 16.971

8. A system for shotgun DNA sequencing.

Authors: J Messing; R Crea; P H Seeburg
Journal: Nucleic Acids Res Date: 1981-01-24 Impact factor: 16.971

9. Ubiquitous, interspersed repeated sequences in mammalian genomes.

Authors: W R Jelinek; T P Toomey; L Leinwand; C H Duncan; P A Biro; P V Choudary; S M Weissman; C M Rubin; C M Houck; P L Deininger; C W Schmid
Journal: Proc Natl Acad Sci U S A Date: 1980-03 Impact factor: 11.205

10. The evolution of a family of short interspersed repeats in primate DNA.

Authors: C M Houck; C W Schmid
Journal: J Mol Evol Date: 1981 Impact factor: 2.395

20 in total

1. Transfer RNA-like structure of the human Alu family: implications of its generation mechanism and possible functions.

Authors: N Okada
Journal: J Mol Evol Date: 1990-12 Impact factor: 2.395

2. Evolution of the master Alu gene(s).

Authors: M R Shen; M A Batzer; P L Deininger
Journal: J Mol Evol Date: 1991-10 Impact factor: 2.395

3. A trinucleotide repeat-associated increase in the level of Alu RNA-binding protein occurred during the same period as the major Alu amplification that accompanied anthropoid evolution.

Authors: D Y Chang; N Sasaki-Tozawa; L K Green; R J Maraia
Journal: Mol Cell Biol Date: 1995-04 Impact factor: 4.272

4. Evolution of secondary structure in the family of 7SL-like RNAs.

Authors: D Labuda; E Zietkiewicz
Journal: J Mol Evol Date: 1994-11 Impact factor: 2.395

5. The SRP9/14 subunit of the human signal recognition particle binds to a variety of Alu-like RNAs and with higher affinity than its mouse homolog.

Authors: F Bovia; N Wolff; S Ryser; K Strub
Journal: Nucleic Acids Res Date: 1997-01-15 Impact factor: 16.971