Literature DB >> 6598198

DNA methylation versus gene expression.

A P Bird.   

Abstract

Vertebrate DNA is methylated at a high proportion of cytosine residues in the sequence CpG, and it has been suggested that the distribution of methylated and non-methylated CpGs in a given cell type influences the pattern of gene expression in those cells. Since a DNA methylation pattern is normally transmitted faithfully to daughter cells via cell division, this idea suggests an origin for stable, clonally inherited patterns of gene expression. This article discusses some of the current evidence for a relationship between DNA methylation and gene expression. Although the evidence is incomplete, it appears already that the relationship is variable: transcription of some genes is repressed by the presence of 5-methylcytosine at certain CpGs, and may be controlled by methylation, while transcription of other genes is indifferent to methylation. In attempting to explain this variability it is helpful to adopt an evolutionary perspective.

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Year:  1984        PMID: 6598198

Source DB:  PubMed          Journal:  J Embryol Exp Morphol        ISSN: 0022-0752


  13 in total

Review 1.  Bridging epigenomics and complex disease: the basics.

Authors:  Raffaele Teperino; Adelheid Lempradl; J Andrew Pospisilik
Journal:  Cell Mol Life Sci       Date:  2013-03-06       Impact factor: 9.261

2.  Association of intronic DNA methylation and hydroxymethylation alterations in the epigenetic etiology of dilated cardiomyopathy.

Authors:  Ali M Tabish; Mohammed Arif; Taejeong Song; Zaher Elbeck; Richard C Becker; Ralph Knöll; Sakthivel Sadayappan
Journal:  Am J Physiol Heart Circ Physiol       Date:  2019-04-26       Impact factor: 4.733

3.  Promoter features related to tissue specificity as measured by Shannon entropy.

Authors:  Jonathan Schug; Winfried-Paul Schuller; Claudia Kappen; J Michael Salbaum; Maja Bucan; Christian J Stoeckert
Journal:  Genome Biol       Date:  2005-03-29       Impact factor: 13.583

4.  Methyl-dependent and spatial-specific DNA recognition by the orthologous transcription factors human AP-1 and Epstein-Barr virus Zta.

Authors:  Samuel Hong; Dongxue Wang; John R Horton; Xing Zhang; Samuel H Speck; Robert M Blumenthal; Xiaodong Cheng
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

5.  Epigenetic regulation of placental gene expression in transcriptional subtypes of preeclampsia.

Authors:  Katherine Leavey; Samantha L Wilson; Shannon A Bainbridge; Wendy P Robinson; Brian J Cox
Journal:  Clin Epigenetics       Date:  2018-03-02       Impact factor: 6.551

6.  Prediction of Plant Height in Arabidopsis thaliana Using DNA Methylation Data.

Authors:  Yaodong Hu; Gota Morota; Guilherme J M Rosa; Daniel Gianola
Journal:  Genetics       Date:  2015-08-06       Impact factor: 4.562

7.  Effects of cytosine methylation on transcription factor binding sites.

Authors:  Yulia A Medvedeva; Abdullah M Khamis; Ivan V Kulakovskiy; Wail Ba-Alawi; Md Shariful I Bhuyan; Hideya Kawaji; Timo Lassmann; Matthias Harbers; Alistair R R Forrest; Vladimir B Bajic
Journal:  BMC Genomics       Date:  2014-03-26       Impact factor: 3.969

8.  A novel analysis strategy for integrating methylation and expression data reveals core pathways for thyroid cancer aetiology.

Authors:  Bugra Ozer; Osman Uğur Sezerman
Journal:  BMC Genomics       Date:  2015-12-09       Impact factor: 3.969

9.  Epigenetic instability of imprinted genes in human cancers.

Authors:  Joomyeong Kim; Corey L Bretz; Suman Lee
Journal:  Nucleic Acids Res       Date:  2015-09-03       Impact factor: 16.971

10.  Decreased DNA Methylation in the Shati/Nat8l Promoter in Both Patients with Schizophrenia and a Methamphetamine-Induced Murine Model of Schizophrenia-Like Phenotype.

Authors:  Kyosuke Uno; Yuu Kikuchi; Mina Iwata; Takashi Uehara; Tadasu Matsuoka; Tomiki Sumiyoshi; Yoshinori Okamoto; Hideto Jinno; Tatsuyuki Takada; Yoko Furukawa-Hibi; Toshitaka Nabeshima; Yoshiaki Miyamoto; Atsumi Nitta
Journal:  PLoS One       Date:  2016-06-27       Impact factor: 3.240

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