Literature DB >> 6584870

Use of Monte Carlo calculations in the study of microtubule subunit kinetics.

Y Chen, T L Hill.   

Abstract

GTP-tubulin forms a cap on microtubule ends during aggregation. The bulk of the microtubule is GDP-tubulin. This complicates the usual simple kinetic theory of subunit exchange at microtubule ends to such an extent that Monte Carlo calculations are needed to handle the complications, except in special cases. The Monte Carlo method is introduced here, for this problem, and illustrated with steady-state and transient examples. Monte Carlo transients are needed to simulate dilution experiments. Preliminary results (with M. F. Carlier) have been obtained applying these theoretical procedures to experimental data.

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Year:  1983        PMID: 6584870      PMCID: PMC389983          DOI: 10.1073/pnas.80.24.7520

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  7 in total

1.  Head to tail polymerization of actin.

Authors:  A Wegner
Journal:  J Mol Biol       Date:  1976-11       Impact factor: 5.469

Review 2.  Bioenergetics and kinetics of microtubule and actin filament assembly-disassembly.

Authors:  T L Hill; M W Kirschner
Journal:  Int Rev Cytol       Date:  1982

3.  Steady-state theory of the interference of GTP hydrolysis in the mechanism of microtubule assembly.

Authors:  T L Hill; M F Carlier
Journal:  Proc Natl Acad Sci U S A       Date:  1983-12       Impact factor: 11.205

4.  Assembly of microtubule protein: role of guanosine di- and triphosphate nucleotides.

Authors:  M F Carlier; D Pantaloni
Journal:  Biochemistry       Date:  1982-03-16       Impact factor: 3.162

Review 5.  Guanosine-5'-triphosphate hydrolysis and tubulin polymerization. Review article.

Authors:  M F Carlier
Journal:  Mol Cell Biochem       Date:  1982-09-03       Impact factor: 3.396

6.  Kinetic analysis of guanosine 5'-triphosphate hydrolysis associated with tubulin polymerization.

Authors:  M F Carlier; D Pantaloni
Journal:  Biochemistry       Date:  1981-03-31       Impact factor: 3.162

7.  Mechanism of K+-induced actin assembly.

Authors:  J D Pardee; J A Spudich
Journal:  J Cell Biol       Date:  1982-06       Impact factor: 10.539

  7 in total
  20 in total

1.  Theoretical kinetic studies of models for binding myosin subfragment-1 to regulated actin: Hill model versus Geeves model.

Authors:  Y Chen ; B Yan; J M Chalovich; B Brenner
Journal:  Biophys J       Date:  2001-05       Impact factor: 4.033

2.  Assembly of chick brain MAP2-tubulin microtubule protein. Analysis of tubulin subunit flux rates by immunofluorescence microscopy.

Authors:  M F Symmons; R G Burns
Journal:  Biochem J       Date:  1991-07-01       Impact factor: 3.857

Review 3.  Role of nucleotide hydrolysis in the polymerization of actin and tubulin.

Authors:  M F Carlier
Journal:  Cell Biophys       Date:  1988 Jan-Jun

4.  Monte Carlo study of the GTP cap in a five-start helix model of a microtubule.

Authors:  Y D Chen; T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1985-02       Impact factor: 11.205

5.  Directed elongation model for microtubule GTP hydrolysis.

Authors:  M Caplow; R Reid
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

6.  Theoretical treatment of microtubules disappearing in solution.

Authors:  Y Chen; T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1985-06       Impact factor: 11.205

7.  Theoretical problems related to the attachment of microtubules to kinetochores.

Authors:  T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1985-07       Impact factor: 11.205

8.  Phase-change kinetics for a microtubule with two free ends.

Authors:  T L Hill
Journal:  Proc Natl Acad Sci U S A       Date:  1985-01       Impact factor: 11.205

Review 9.  Treadmilling, diffusional exchange and cytoplasmic structures.

Authors:  A B Fulton
Journal:  J Muscle Res Cell Motil       Date:  1985-06       Impact factor: 2.698

10.  Time series characterization of simulated microtubule dynamics in the nerve growth cone.

Authors:  D J Odde; H M Buettner
Journal:  Ann Biomed Eng       Date:  1995 May-Jun       Impact factor: 3.934

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