Literature DB >> 6546442

Computer programs used to aid in the selection of DNA hybridization probes.

R E Raupach.   

Abstract

This paper describes a package of three programs which used together aid in selecting the best possible sequence to be used as a DNA hybridization probe. This system searches an amino acid sequence for four adjacent amino acids with the fewest possible corresponding mRNA sequences, calculates their probability of occurrence, and locates the positions of wobbles and mismatches between the DNA hybridization probe and the possible mRNA sequences.

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Year:  1984        PMID： 6546442      PMCID： PMC321098          DOI： 10.1093/nar/12.1part2.833

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  3 in total

1.  Biogenesis of mitochondria: the mitochondrial gene (aap1) coding for mitochondrial ATPase subunit 8 in Saccharomyces cerevisiae.

Authors:  I G Macreadie; C E Novitski; R J Maxwell; U John; B G Ooi; G L McMullen; H B Lukins; A W Linnane; P Nagley
Journal:  Nucleic Acids Res       Date:  1983-07-11       Impact factor: 16.971

2.  Sequence of the gene coding for the beta-subunit of dinitrogenase from the blue-green alga Anabaena.

Authors:  B J Mazur; C F Chui
Journal:  Proc Natl Acad Sci U S A       Date:  1982-11       Impact factor: 11.205

3.  A cloned cyanobacterial gene for glutamine synthetase functions in Escherichia coli, but the enzyme is not adenylylated.

Authors:  R Fisher; R Tuli; R Haselkorn
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205
  3 in total
  1 in total

1.  BIGPROBE: a computer program that predicts the sequence of long oligonucleotide probes with high reliability.

Authors:  M Dubnick; L K Lewis; D W Mount
Journal:  Nucleic Acids Res       Date:  1988-03-11       Impact factor: 16.971
  1 in total

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